Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN3O15551 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.25□□□□□ -1.73
CLDN3O15551 HSPE1P5-201ENST00000561489 272 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN3O15551 AC090751.1-201ENST00000566966 267 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 MIR5685-201ENST00000579080 79 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN3O15551 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.25□□□□□ -1.73
CLDN3O15551 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN3O15551 AL451086.1-201ENST00000605596 223 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN3O15551 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN3O15551 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN3O15551 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN3O15551 AL136964.1-201ENST00000622038 2990 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN3O15551 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN3O15551 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN3O15551 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN3O15551 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN3O15551 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.24□□□□□ -1.73
CLDN3O15551 ZNF602P-201ENST00000405929 924 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN3O15551 RPS12P23-201ENST00000419579 400 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 MTND2P11-201ENST00000423638 648 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 HMGB3P5-201ENST00000428894 612 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN3O15551 KCTD10P1-201ENST00000434203 625 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 AC096638.2-201ENST00000434965 711 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN3O15551 AL513321.1-201ENST00000441175 761 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 RPS15AP29-201ENST00000445539 400 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 AC069540.1-201ENST00000446320 988 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 MTND2P3-201ENST00000452458 470 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 RPL23AP23-201ENST00000452590 471 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 MTND2P6-201ENST00000455337 1030 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN3O15551 RPL7P24-201ENST00000493052 752 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN3O15551 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN3O15551 AC110792.2-201ENST00000510278 224 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN3O15551 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN3O15551 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN3O15551 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN3O15551 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.24□□□□□ -1.73
CLDN3O15551 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.24□□□□□ -1.73
CLDN3O15551 AC093014.1-201ENST00000548926 724 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 AP000919.1-202ENST00000581139 1264 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.24□□□□□ -1.73
CLDN3O15551 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN3O15551 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN3O15551 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.24□□□□□ -1.73
CLDN3O15551 FP236240.3-201ENST00000623061 327 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CLDN3O15551 AF001550.2-201ENST00000636643 217 ntBASIC4.24□□□□□ -1.73
CLDN3O15551 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN3O15551 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.24□□□□□ -1.73
CLDN3O15551 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN3O15551 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN3O15551 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLDN3O15551 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CLDN3O15551 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN3O15551 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN3O15551 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CLDN3O15551 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN3O15551 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN3O15551 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN3O15551 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLDN3O15551 RNA5SP391-201ENST00000363456 119 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 U3.15-201ENST00000365398 212 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 HNRNPDP2-201ENST00000406475 478 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 AC004987.3-201ENST00000413879 771 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN3O15551 ARL2BPP3-201ENST00000421226 480 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLDN3O15551 PTP4A1P3-201ENST00000433661 420 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN3O15551 ARL5AP2-201ENST00000444698 533 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN3O15551 AC091959.2-201ENST00000477363 321 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN3O15551 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN3O15551 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN3O15551 RN7SKP82-201ENST00000516786 223 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN3O15551 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN3O15551 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN3O15551 COX6B1P6-201ENST00000522347 255 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 CIR1P1-201ENST00000524055 1133 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN3O15551 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN3O15551 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.23□□□□□ -1.73
CLDN3O15551 AC079610.2-201ENST00000604818 690 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 AC135178.6-201ENST00000605314 398 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 AC011374.2-201ENST00000607135 526 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 AC006946.3-201ENST00000609791 756 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 AC078899.5-201ENST00000612475 178 ntBASIC4.23□□□□□ -1.73
CLDN3O15551 AC245389.2-201ENST00000616023 576 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms