Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM38O00635 AC126323.6-202ENST00000568092 3511 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM38O00635 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM38O00635 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TRIM38O00635 SCARNA15-201ENST00000607520 4325 ntBASIC4.96□□□□□ -1.62
TRIM38O00635 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM38O00635 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 MFSD8-216ENST00000641147 4009 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TRIM38O00635 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM38O00635 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
TRIM38O00635 RNA5SP505-201ENST00000364748 108 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRIM38O00635 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRIM38O00635 Z97832.1-201ENST00000402490 328 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 MTCO3P31-201ENST00000405526 789 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AL133264.1-201ENST00000407157 562 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TRIM38O00635 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 IFNNP1-201ENST00000429219 553 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 DLGAP5P1-201ENST00000430307 464 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AL513175.1-201ENST00000431492 780 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 BX323845.1-201ENST00000432417 179 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC010881.1-201ENST00000433830 235 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM38O00635 B3GNT2P1-201ENST00000434960 952 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 RPL7P11-201ENST00000437586 658 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM38O00635 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM38O00635 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 GEMIN8P3-201ENST00000445417 720 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 NDUFA12P1-201ENST00000455914 406 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM38O00635 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC011352.3-201ENST00000505162 593 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 RPL23AP53-201ENST00000521854 457 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.95□□□□□ -1.62
TRIM38O00635 AP000619.3-201ENST00000535634 1127 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AP006289.1-201ENST00000538089 277 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.95□□□□□ -1.62
TRIM38O00635 NBEAP1-201ENST00000554452 979 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC233702.9-201ENST00000581528 203 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AC209154.1-201ENST00000582156 337 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM38O00635 AC121247.2-201ENST00000604776 136 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AP001596.2-201ENST00000608410 312 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 SAGE4P-201ENST00000442271 3381 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM38O00635 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM38O00635 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 SDAD1P1-202ENST00000524156 2051 ntBASIC4.95□□□□□ -1.62
TRIM38O00635 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM38O00635 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM38O00635 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM38O00635 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TRIM38O00635 MAPK10-263ENST00000641052 4307 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC079741.1-201ENST00000321498 212 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TRIM38O00635 RNA5SP191-201ENST00000362585 102 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 Y_RNA.51-201ENST00000362725 102 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 RNA5SP391-201ENST00000363456 119 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 RNU1-32P-201ENST00000363937 159 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM38O00635 BMS1P3-201ENST00000372011 932 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 RPS4XP9-201ENST00000405151 780 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 RPS16P5-201ENST00000406501 404 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 RAD23BP2-201ENST00000416003 1207 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC009237.2-201ENST00000421358 284 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM38O00635 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms