Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3□□□□□ -1.93
SDCBPO00560 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SDCBPO00560 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3□□□□□ -1.93
SDCBPO00560 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3□□□□□ -1.93
SDCBPO00560 AC010329.2-201ENST00000595195 2737 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.99□□□□□ -1.93
SDCBPO00560 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.99□□□□□ -1.93
SDCBPO00560 AC066616.2-201ENST00000559334 1481 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDCBPO00560 RNU6-167P-201ENST00000384292 106 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 U3.39-201ENST00000408569 239 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 LIPT1P1-201ENST00000415870 1186 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.99□□□□□ -1.93
SDCBPO00560 RPL31P12-201ENST00000422587 358 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 SDCBPP2-201ENST00000424643 885 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 AL138785.1-201ENST00000425821 331 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 BX679664.1-201ENST00000434429 253 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.99□□□□□ -1.93
SDCBPO00560 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.99□□□□□ -1.93
SDCBPO00560 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SDCBPO00560 AL136097.1-201ENST00000456945 913 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 AC093267.1-201ENST00000489176 961 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 NPM1P41-201ENST00000512920 831 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 FTH1P9-201ENST00000513251 355 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.99□□□□□ -1.93
SDCBPO00560 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.99□□□□□ -1.93
SDCBPO00560 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.99□□□□□ -1.93
SDCBPO00560 AC026333.2-201ENST00000542164 106 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 DUXAP6-201ENST00000553858 601 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 AC068714.1-201ENST00000559623 800 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 MIR3186-201ENST00000577404 85 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC2.99□□□□□ -1.93
SDCBPO00560 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.99□□□□□ -1.93
SDCBPO00560 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.99□□□□□ -1.93
SDCBPO00560 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.99□□□□□ -1.93
SDCBPO00560 AC022146.1-201ENST00000595307 847 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 VN1R85P-201ENST00000601587 426 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 AC010680.3-201ENST00000604215 520 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.99□□□□□ -1.93
SDCBPO00560 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDCBPO00560 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
SDCBPO00560 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDCBPO00560 AC022893.2-201ENST00000564832 3296 ntBASIC2.99□□□□□ -1.93
SDCBPO00560 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDCBPO00560 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SDCBPO00560 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SDCBPO00560 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SDCBPO00560 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
SDCBPO00560 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SDCBPO00560 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.98□□□□□ -1.93
SDCBPO00560 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.98□□□□□ -1.93
SDCBPO00560 RPL7P60-201ENST00000397636 735 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SDCBPO00560 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SDCBPO00560 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.98□□□□□ -1.93
SDCBPO00560 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SDCBPO00560 AC091390.1-201ENST00000433904 331 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.98□□□□□ -1.93
SDCBPO00560 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.98□□□□□ -1.93
SDCBPO00560 AC069277.2-201ENST00000454211 432 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 RPS4XP2-201ENST00000458402 793 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.98□□□□□ -1.93
SDCBPO00560 CYCSP20-201ENST00000473154 315 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 AC103987.1-201ENST00000473394 348 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 AC068587.1-201ENST00000483613 781 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 AP000563.1-201ENST00000490865 758 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.98□□□□□ -1.93
SDCBPO00560 PRELID3BP5-201ENST00000508612 460 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SDCBPO00560 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.98□□□□□ -1.93
SDCBPO00560 AC026402.1-201ENST00000513642 170 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 RNU6-579P-201ENST00000516879 102 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.98□□□□□ -1.93
SDCBPO00560 AP000926.4-201ENST00000527351 454 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SDCBPO00560 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SDCBPO00560 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.98□□□□□ -1.93
SDCBPO00560 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.98□□□□□ -1.93
SDCBPO00560 AC119501.1-201ENST00000603646 475 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.98□□□□□ -1.93
SDCBPO00560 AC016717.3-201ENST00000624730 554 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.98□□□□□ -1.93
SDCBPO00560 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SDCBPO00560 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.98□□□□□ -1.93
SDCBPO00560 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SDCBPO00560 OR10AB1P-202ENST00000641219 1686 ntBASIC2.98□□□□□ -1.93
SDCBPO00560 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SDCBPO00560 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SDCBPO00560 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.97□□□□□ -1.93
SDCBPO00560 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SDCBPO00560 AC058791.1-201ENST00000608412 3198 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 MTCO1P14-201ENST00000441695 1559 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC2.97□□□□□ -1.93
SDCBPO00560 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.97□□□□□ -1.93
SDCBPO00560 AC245054.1-201ENST00000420944 258 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.97□□□□□ -1.93
SDCBPO00560 AC093084.1-201ENST00000424233 687 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.97□□□□□ -1.93
SDCBPO00560 USP9YP7-201ENST00000436723 430 ntBASIC2.97□□□□□ -1.93
SDCBPO00560 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms