Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC234779.1-201ENST00000425910 285 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 DPY19L1P2-201ENST00000426647 915 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 ZNF886P-201ENST00000450781 723 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 NAP1L1P3-201ENST00000462291 880 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 RPL23AP12-201ENST00000467573 473 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC041039.1-201ENST00000485656 536 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC091167.1-201ENST00000492017 396 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 RPL21P131-201ENST00000497298 483 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 PARP4P3-201ENST00000510265 317 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 VWA8P1-201ENST00000510889 176 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC090151.1-201ENST00000520784 730 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 MTATP6P15-201ENST00000527233 835 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC006518.2-201ENST00000542513 940 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 OR4U1P-201ENST00000554958 912 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 RPL21P7-201ENST00000557463 483 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC009097.3-201ENST00000563557 1018 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 CCDC58P3-201ENST00000590792 430 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC002487.1-201ENST00000604565 994 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC026368.1-201ENST00000614934 690 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC011472.4-201ENST00000615848 491 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC007546.1-201ENST00000619452 559 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC123767.1-202ENST00000620407 817 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 AC022079.1-201ENST00000621546 602 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 CU459211.1-201ENST00000635667 749 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 OR52H1-202ENST00000641796 1061 ntBASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNX9Q9Y5X1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 RNA5SP502-201ENST00000362694 119 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 RNU1-20P-201ENST00000363314 162 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 RNU6-1242P-201ENST00000391052 103 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 RPL7P27-201ENST00000403775 720 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 RPS7P9-201ENST00000414704 586 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 TCEA1P4-201ENST00000415066 844 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 RPL22P18-201ENST00000417197 377 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 MTCO2P21-201ENST00000419780 677 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AL157831.1-201ENST00000426134 473 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 CEACAMP1-201ENST00000434624 1035 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AL512326.1-201ENST00000443050 721 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 NUTF2P3-201ENST00000448540 384 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 UQCRHP4-201ENST00000471686 272 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC012158.1-204ENST00000483430 465 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC105137.1-201ENST00000484355 562 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 RPL35P6-201ENST00000490024 372 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC090281.1-201ENST00000523019 276 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 MIR4697-201ENST00000582977 78 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC069366.1-201ENST00000583159 838 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC011477.5-201ENST00000586571 259 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC245036.5-201ENST00000596330 847 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC113368.1-201ENST00000603736 382 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AL590392.1-201ENST00000604960 446 ntBASIC4.62□□□□□ -1.67
SNX9Q9Y5X1 AC107952.2-201ENST00000606048 486 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms