Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TREML3P-201ENST00000457327 501 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 RPL35AP28-201ENST00000459730 331 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 UBFD1P1-201ENST00000473259 814 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC092824.1-201ENST00000483524 576 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC092436.1-201ENST00000506450 503 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 MRPL57P6-201ENST00000506570 309 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC093815.1-201ENST00000508637 280 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC138517.1-201ENST00000515724 568 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 RN7SKP196-201ENST00000516267 345 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 DEFB109D-201ENST00000529497 240 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 OR4P1P-201ENST00000530808 1136 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AP000889.2-201ENST00000532684 490 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AL008723.3-201ENST00000608926 449 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AL031666.3-201ENST00000609320 1006 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC103710.2-201ENST00000609912 942 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC133104.2-201ENST00000615272 193 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC087588.2-201ENST00000617667 426 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC135068.12-201ENST00000637370 931 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC119674.1-207ENST00000641355 633 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 AC009313.2-201ENST00000417893 1941 ntBASIC6.33□□□□□ -1.4
PCDHGA11Q9Y5H2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC007342.5-201ENST00000571340 2142 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC027575.3-201ENST00000583058 2747 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC123769.1-201ENST00000530992 3192 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RNA5SP442-201ENST00000365050 107 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU6-1029P-201ENST00000384109 107 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 MIR138-2-201ENST00000384916 84 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL360271.1-201ENST00000395679 510 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RN7SKP158-201ENST00000410453 326 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 Y_RNA.605-201ENST00000410577 105 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RNA5SP251-201ENST00000410614 137 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL354890.1-201ENST00000413730 346 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RPS17P17-201ENST00000419392 409 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL031736.2-201ENST00000426573 787 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 BRWD1P3-201ENST00000428816 390 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL359265.2-201ENST00000434367 631 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL590399.4-201ENST00000436561 601 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 FHP1-201ENST00000442741 703 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 GAPDHP33-201ENST00000443168 1013 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RPL32P28-201ENST00000443577 397 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL121578.2-201ENST00000448797 447 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC104308.1-201ENST00000454621 333 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 Y_RNA.653-201ENST00000459091 95 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU6-1208P-201ENST00000459588 107 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC079804.1-201ENST00000461922 436 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RN7SL372P-201ENST00000461982 298 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL136126.1-201ENST00000473603 402 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL049874.2-201ENST00000492636 288 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC025164.1-201ENST00000496249 478 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC017037.1-201ENST00000508460 471 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU6-273P-201ENST00000516937 96 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms