Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 MTND4P18-201ENST00000447010 465 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AURKAPS2-201ENST00000454983 333 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 NIP7P2-201ENST00000485801 544 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 ARL4AP1-201ENST00000503220 705 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC073358.1-201ENST00000505671 684 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 PGBD4P4-201ENST00000509673 613 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC008837.2-201ENST00000513076 418 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC023632.1-201ENST00000518463 375 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 IGKV1-32-201ENST00000519290 311 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 RAB9BP1-201ENST00000519581 626 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AP006289.1-201ENST00000538089 277 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC068446.3-201ENST00000555285 382 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC012435.1-202ENST00000568772 240 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC090312.1-201ENST00000580637 348 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC125494.3-201ENST00000602759 455 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AL607023.1-201ENST00000620045 248 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC007342.8-201ENST00000623278 678 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC005539.1-201ENST00000443768 1479 ntBASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.68□□□□□ -1.5
CTDP1Q9Y5B0 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 MAPK10-328ENST00000641553 4009 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 ENSAP3-201ENST00000312710 333 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 SNORA73.1-201ENST00000363107 205 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 RNU6-244P-201ENST00000391028 104 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC136624.1-201ENST00000400791 413 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AL663109.1-201ENST00000411498 844 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 FAR2P2-201ENST00000413041 594 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC114755.2-201ENST00000413520 361 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 TBCAP2-201ENST00000416175 326 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 MTCO2P34-201ENST00000421994 607 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 FAR2P4-202ENST00000425399 584 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 DNAJC19P7-201ENST00000428811 344 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 MTCO1P3-201ENST00000429327 192 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 NRBF2P3-201ENST00000432731 865 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 RN7SL481P-201ENST00000477764 299 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 CEACAMP10-202ENST00000495431 496 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 ENPP7P9-201ENST00000514456 627 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 HNRNPKP5-201ENST00000515300 253 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 PDCD5P1-201ENST00000543528 309 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 GSTP1P1-201ENST00000548078 319 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC022146.1-201ENST00000595307 847 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC234771.5-201ENST00000600161 514 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AL451074.6-201ENST00000608512 729 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC091932.2-201ENST00000623014 291 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AL160394.1-201ENST00000624765 724 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AF001550.2-201ENST00000636643 217 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 AL592437.2-201ENST00000421655 2434 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 ZNF652P1-201ENST00000442420 1309 ntBASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CTDP1Q9Y5B0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms