Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC027287.1-201ENST00000553115 1453 ntBASIC4.94□□□□□ -1.62
NPC1L1Q9UHC9 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPC1L1Q9UHC9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NPC1L1Q9UHC9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPC1L1Q9UHC9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 MIR491-201ENST00000384877 84 ntBASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 U3.39-201ENST00000408569 239 ntBASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 CYCSP43-201ENST00000438233 310 ntBASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 PDSS1P2-201ENST00000449397 678 ntBASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 RBMY2UP-201ENST00000453474 324 ntBASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 OR4V1P-201ENST00000525394 1140 ntBASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AC023161.2-201ENST00000551218 780 ntBASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AC023813.4-201ENST00000607580 580 ntBASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 RMST_5.1-201ENST00000618704 126 ntBASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 AC244205.2-202ENST00000635781 342 ntBASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.93□□□□□ -1.62
NPC1L1Q9UHC9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AC007823.1-201ENST00000569932 1566 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 SAGE2P-201ENST00000420011 2126 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AL035423.1-201ENST00000420331 213 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AC093084.1-201ENST00000424233 687 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 OSTCP5-201ENST00000425293 453 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 SKP1P1-201ENST00000438081 489 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 RPS15AP29-201ENST00000445539 400 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AC005798.1-201ENST00000513715 387 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 RN7SKP83-201ENST00000516512 178 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 snoU109.6-201ENST00000516831 118 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AP000926.4-201ENST00000527351 454 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AC067805.1-201ENST00000559344 470 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AC015967.1-201ENST00000619893 476 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AL732372.2-225ENST00000642124 456 ntBASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPC1L1Q9UHC9 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 MIR34B-201ENST00000385076 84 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 SNORA11.2-201ENST00000408318 127 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 KRR1P1-201ENST00000419430 803 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 NPM1P17-201ENST00000479221 602 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 AC106707.2-201ENST00000484182 374 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 RN7SKP18-201ENST00000516005 275 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 SOD1P3-201ENST00000518682 454 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 AC025946.2-201ENST00000603398 234 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 HMGB1P51-201ENST00000605166 638 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 AL160281.1-201ENST00000605307 311 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 AC020658.4-201ENST00000613987 684 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 AC069209.1-201ENST00000619282 651 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 MAPK10-373ENST00000641983 6772 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 RN7SKP111-201ENST00000410349 271 ntBASIC4.91□□□□□ -1.62
NPC1L1Q9UHC9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms