Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AL627171.1-201ENST00000618845 1308 ntBASIC3.71□□□□□ -1.81
TREX1Q9NSU2 AC026951.1-201ENST00000559530 2459 ntBASIC3.71□□□□□ -1.81
TREX1Q9NSU2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.71□□□□□ -1.81
TREX1Q9NSU2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 RNU6-283P-201ENST00000364788 107 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 SNORD6-201ENST00000365444 73 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 HMGB3P20-201ENST00000417997 600 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 TCEA1P2-201ENST00000420496 906 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AL139247.1-201ENST00000422768 325 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 USP9YP7-201ENST00000436723 430 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AL645931.1-201ENST00000439737 410 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 VN1R48P-201ENST00000448149 1036 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 USP9YP32-201ENST00000452432 430 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 NANOGP10-201ENST00000453325 895 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 RPL23AP12-201ENST00000467573 473 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AL139099.1-201ENST00000497398 403 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AC008011.1-201ENST00000545989 227 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 EIF1AXP2-201ENST00000555940 413 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AL121576.1-201ENST00000556055 276 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 MIR4286-201ENST00000580651 93 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AL391597.1-201ENST00000618707 694 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 MIR6810-201ENST00000622701 70 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AP003072.4-201ENST00000624580 310 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 CDRT1-208ENST00000630868 794 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 OR6C71P-202ENST00000641886 1107 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 AC006504.1-201ENST00000562493 3666 ntBASIC3.71□□□□□ -1.82
TREX1Q9NSU2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TREX1Q9NSU2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 RNU4-23P-201ENST00000362839 140 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 RNU6-532P-201ENST00000384318 107 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 GSTA12P-201ENST00000402398 508 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AL391417.1-201ENST00000404100 426 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AMD1P2-201ENST00000412936 992 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 OR4F13P-201ENST00000428478 931 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 ELOCP6-201ENST00000429066 328 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 MTCO1P52-201ENST00000433928 531 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 Z85994.2-201ENST00000434327 452 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 MTCO3P16-201ENST00000454456 754 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 TVP23BP2-201ENST00000455082 615 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC099563.1-201ENST00000456086 418 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 HMGN2P7-201ENST00000456186 273 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 ELOCP12-201ENST00000458706 328 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AL133162.1-201ENST00000463228 453 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 TMED11P-201ENST00000479478 690 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 CDH12P2-201ENST00000504393 298 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC093853.1-201ENST00000515689 483 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC092868.3-201ENST00000560515 784 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AGGF1P8-201ENST00000562979 1000 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 MIR5187-201ENST00000583479 76 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC020910.2-201ENST00000603635 610 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC067959.1-201ENST00000604334 379 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC005344.1-201ENST00000613391 459 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC116563.2-201ENST00000624751 535 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC019080.5-201ENST00000624891 757 ntBASIC3.7□□□□□ -1.82
TREX1Q9NSU2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TREX1Q9NSU2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms