Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AP001005.3-201ENST00000622049 129 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 AC016717.3-201ENST00000624730 554 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 ATE1-AS1-202ENST00000636460 506 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 DCAF13P3-201ENST00000561147 1334 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 A2MP1-204ENST00000566278 4130 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 NCLP2-201ENST00000416078 1462 ntBASIC4.87□□□□□ -1.63
USP29Q9HBJ7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP29Q9HBJ7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 Y_RNA.408-201ENST00000383987 102 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AL590084.2-201ENST00000401481 382 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AL080315.1-201ENST00000406055 466 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 BX510359.2-201ENST00000417920 305 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC098592.1-201ENST00000419352 333 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 UBE2V1P5-201ENST00000440070 405 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 RPL21P133-201ENST00000443666 476 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 YWHAQP9-201ENST00000445891 512 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AL591623.2-201ENST00000449978 222 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 RPL10P17-201ENST00000453852 316 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 BZW1P2-201ENST00000473537 826 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 LINC00888-204ENST00000487386 421 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC091868.1-201ENST00000508746 304 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC079395.1-201ENST00000510981 262 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC021146.3-201ENST00000511911 260 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 TCP11X3P-202ENST00000514289 1254 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC105185.1-201ENST00000518705 535 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 MTCO1P49-201ENST00000523429 802 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC005832.3-201ENST00000537929 631 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC133555.2-201ENST00000550213 292 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC084824.1-201ENST00000550917 1005 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC015912.2-201ENST00000571053 181 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 MIR4284-201ENST00000578924 81 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC022069.1-201ENST00000582910 658 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC105129.3-201ENST00000605455 485 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AL451086.1-201ENST00000605596 223 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AL353726.1-201ENST00000614041 1000 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC090246.1-201ENST00000616499 426 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC023509.5-201ENST00000617434 807 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AL359757.1-201ENST00000623176 255 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC091965.5-201ENST00000624785 342 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AC068620.4-201ENST00000636730 1182 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 ELL2P3-201ENST00000457883 1602 ntBASIC4.86□□□□□ -1.63
USP29Q9HBJ7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP29Q9HBJ7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC107027.3-201ENST00000565095 3473 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AL391994.1-201ENST00000254724 282 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 IL6STP1-201ENST00000346911 1020 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 RNU1-94P-201ENST00000362627 173 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms