Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 PWAR1-201ENST00000624188 2414 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 Z95331.1-201ENST00000623075 23112 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC068870.1-201ENST00000563737 2455 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC046144.1-201ENST00000478559 1853 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AL121886.1-201ENST00000358609 435 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 RNU6-1085P-201ENST00000363576 107 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 JKAMPP1-201ENST00000413804 919 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AF228730.4-201ENST00000421457 183 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AL513185.2-201ENST00000425543 193 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC002486.1-201ENST00000435098 391 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC064862.4-201ENST00000442180 334 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AL161636.2-201ENST00000445179 927 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 HMGN1P36-201ENST00000446623 298 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC079448.1-201ENST00000449377 373 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 RPL31P15-201ENST00000449770 338 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 GAPDHP14-201ENST00000450472 937 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AL445665.1-202ENST00000452436 324 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 NDUFA5P7-201ENST00000452914 242 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 NF1P3-201ENST00000457709 450 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 NXT1P1-201ENST00000458481 316 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 PPIAP19-201ENST00000486414 492 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC010493.1-201ENST00000513479 292 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 RNA5SP216-201ENST00000516111 123 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC112191.2-201ENST00000522428 333 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 DUX4L52-201ENST00000549363 777 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 CBX3P5-201ENST00000552017 521 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AL359219.2-201ENST00000555184 348 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AL359212.1-201ENST00000556608 614 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC093519.1-201ENST00000566109 298 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC006363.1-201ENST00000603806 463 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AL035413.2-201ENST00000604801 525 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 RN7SL544P-201ENST00000617232 284 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 RN7SL763P-201ENST00000620922 284 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC009268.2-201ENST00000621925 457 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC005618.4-201ENST00000625053 554 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AC006065.6-201ENST00000625201 545 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 MIR193BHG-214ENST00000641765 509 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AP001029.2-203ENST00000589795 4910 ntBASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
SEC61A2Q9H9S3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC006484.1-201ENST00000435086 1884 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 HSPA8P14-201ENST00000552265 1805 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AC010928.1-201ENST00000592477 1447 ntBASIC5□□□□□ -1.61
SEC61A2Q9H9S3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A2Q9H9S3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms