Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC090666.1-201ENST00000578241 445 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 MIR5047-201ENST00000579212 100 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 RMST_8.1-201ENST00000610287 165 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AL512624.1-201ENST00000613638 469 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC091046.2-201ENST00000620775 665 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC007342.8-201ENST00000623278 678 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC126544.2-201ENST00000625174 749 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC099654.9-201ENST00000637055 678 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC006927.2-201ENST00000639256 389 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 MAPK10-372ENST00000641954 3413 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AL645568.2-201ENST00000432815 1337 ntBASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC28BQ9BUN5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 SNORA51.1-201ENST00000363243 140 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 MIR320B1-201ENST00000390209 79 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 MIR1178-201ENST00000408396 91 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 MIR1251-201ENST00000408552 70 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 RN7SKP285-201ENST00000410137 318 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 NRBF2P2-201ENST00000413087 861 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC105402.1-201ENST00000413336 545 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AL445183.3-201ENST00000414168 502 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 PTP4A1P7-201ENST00000423476 514 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 DEFB130D-201ENST00000426866 237 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC093422.3-201ENST00000428506 305 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 FO393419.3-201ENST00000428741 282 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 MTCO1P52-201ENST00000433928 531 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 RPS7P2-201ENST00000435134 607 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 ARL2BPP10-201ENST00000446487 531 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 RPL7P32-201ENST00000457119 744 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 RPL35P6-201ENST00000490024 372 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 RPS27AP16-201ENST00000492222 470 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 RPL29P14-201ENST00000495837 428 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 KRT19P6-201ENST00000510983 209 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 RNU6-415P-201ENST00000516252 97 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 RNA5SP49-201ENST00000516450 115 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC010376.1-201ENST00000522101 334 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 SMARCE1P4-201ENST00000523647 241 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 NPM1P35-201ENST00000533043 868 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC092747.2-201ENST00000545069 983 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC010735.1-201ENST00000567305 1026 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC022146.1-201ENST00000595307 847 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AP002802.2-201ENST00000605877 235 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 OR2BH1P-201ENST00000608850 864 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AL713922.2-201ENST00000619384 716 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC073342.3-201ENST00000624211 193 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AP003485.1-201ENST00000625093 753 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 OR4G3P-201ENST00000633500 913 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC132825.7-201ENST00000638744 335 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 AC013437.2-201ENST00000639587 677 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 MTCO1P18-201ENST00000455518 1419 ntBASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC28BQ9BUN5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 CEP170P1-201ENST00000502249 4587 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC090229.1-201ENST00000590983 1609 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AL158163.1-201ENST00000603915 1649 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 RNU6-244P-201ENST00000391028 104 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 ATF1P1-201ENST00000406040 927 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC023128.2-201ENST00000420880 1223 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AL358472.1-201ENST00000431295 329 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms