Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MTCYBP33-201ENST00000575007 1130 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 AC090312.2-201ENST00000582687 378 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.41□□□□□ -1.7
PKP4Q99569 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.41□□□□□ -1.7
PKP4Q99569 AC125494.3-201ENST00000602759 455 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 AL353778.1-201ENST00000603149 408 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 Z99497.2-201ENST00000603634 310 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 AC010680.4-201ENST00000605334 543 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 AC007349.4-201ENST00000608114 532 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.41□□□□□ -1.7
PKP4Q99569 AL136295.6-201ENST00000610486 658 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 AC010975.3-201ENST00000618727 978 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.41□□□□□ -1.7
PKP4Q99569 AL121895.2-201ENST00000619558 447 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKP4Q99569 AC067852.7-201ENST00000623270 535 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.41□□□□□ -1.7
PKP4Q99569 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.41□□□□□ -1.7
PKP4Q99569 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PKP4Q99569 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PKP4Q99569 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PKP4Q99569 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKP4Q99569 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKP4Q99569 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
PKP4Q99569 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
PKP4Q99569 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKP4Q99569 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
PKP4Q99569 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PKP4Q99569 AC027290.2-201ENST00000623210 18662 ntBASIC4.41□□□□□ -1.7
PKP4Q99569 AC017007.4-201ENST00000503353 1352 ntBASIC4.4□□□□□ -1.7
PKP4Q99569 A2MP1-204ENST00000566278 4130 ntBASIC4.4□□□□□ -1.7
PKP4Q99569 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.4□□□□□ -1.7
PKP4Q99569 CPHL1P-201ENST00000461341 3407 ntBASIC4.4□□□□□ -1.7
PKP4Q99569 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.4□□□□□ -1.7
PKP4Q99569 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
PKP4Q99569 EIF2AP4-201ENST00000424793 1781 ntBASIC4.4□□□□□ -1.7
PKP4Q99569 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.4□□□□□ -1.7
PKP4Q99569 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.4□□□□□ -1.7
PKP4Q99569 DHX40P1-201ENST00000588725 1412 ntBASIC4.4□□□□□ -1.7
PKP4Q99569 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.4□□□□□ -1.7
PKP4Q99569 ANKRD36P1-201ENST00000344424 659 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 RNU6-1214P-201ENST00000363650 109 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 RNU4-92P-201ENST00000363783 136 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKP4Q99569 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PKP4Q99569 RNU6-224P-201ENST00000384055 107 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 Y_RNA.578-201ENST00000390903 88 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 SDHCP2-201ENST00000398565 501 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.4□□□□□ -1.71
PKP4Q99569 AC092638.1-201ENST00000411966 1275 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 HSFY4P-201ENST00000415994 1181 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKP4Q99569 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKP4Q99569 AP001324.1-201ENST00000428553 399 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 ETF1P3-201ENST00000430422 1160 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.4□□□□□ -1.71
PKP4Q99569 AC105402.2-201ENST00000438503 358 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 EEF1A1P39-201ENST00000440791 250 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKP4Q99569 AC011753.3-201ENST00000443436 406 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 AC068135.1-201ENST00000446164 246 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.4□□□□□ -1.71
PKP4Q99569 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.4□□□□□ -1.71
PKP4Q99569 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.4□□□□□ -1.71
PKP4Q99569 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
PKP4Q99569 MTND2P14-201ENST00000482139 351 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 AC008897.1-201ENST00000494006 347 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 AC091435.1-201ENST00000505442 584 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.4□□□□□ -1.71
PKP4Q99569 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.4□□□□□ -1.71
PKP4Q99569 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.4□□□□□ -1.71
PKP4Q99569 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.4□□□□□ -1.71
PKP4Q99569 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.4□□□□□ -1.71
PKP4Q99569 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PKP4Q99569 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.4□□□□□ -1.71
PKP4Q99569 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.4□□□□□ -1.71
PKP4Q99569 AL109653.1-201ENST00000603091 248 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 AC103792.1-201ENST00000603591 919 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 AL358072.1-201ENST00000604156 575 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PKP4Q99569 AL133243.1-201ENST00000614487 366 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 AC023509.5-201ENST00000617434 807 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 AC092140.2-201ENST00000618027 521 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PKP4Q99569 AL049536.1-201ENST00000625043 744 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 LINC01808-202ENST00000641680 1116 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 AC012618.3-205ENST00000637896 1496 ntBASIC4.4□□□□□ -1.71
PKP4Q99569 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PKP4Q99569 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PKP4Q99569 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PKP4Q99569 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.4□□□□□ -1.71
PKP4Q99569 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PKP4Q99569 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PKP4Q99569 MFSD8-216ENST00000641147 4009 ntBASIC4.39□□□□□ -1.71
PKP4Q99569 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PKP4Q99569 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.39□□□□□ -1.71
PKP4Q99569 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PKP4Q99569 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.39□□□□□ -1.71
PKP4Q99569 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.39□□□□□ -1.71
PKP4Q99569 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms