Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC112191.3-201ENST00000604371 277 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AC005899.7-201ENST00000618199 588 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AC090574.1-201ENST00000623186 233 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 OR4G11P-202ENST00000642116 1414 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.4
SYNGAP1Q96PV0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
SYNGAP1Q96PV0 RPL23P2-201ENST00000320371 421 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 RNU6-483P-201ENST00000384088 108 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 SNORA67-201ENST00000384423 137 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AL590004.1-201ENST00000405321 300 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AL034374.1-201ENST00000406329 351 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 MTND1P18-201ENST00000448191 573 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AL035090.1-201ENST00000454835 332 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 RPL12P39-201ENST00000455456 496 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 OR6K1P-201ENST00000456766 971 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC098799.3-201ENST00000506095 438 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 SAP18P1-201ENST00000512058 390 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 OR8A2P-201ENST00000528631 952 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AL157687.1-201ENST00000554853 619 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AL390334.1-201ENST00000556395 450 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 TRAV15-201ENST00000556680 249 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC136618.2-201ENST00000575091 400 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 MIR4795-201ENST00000584182 89 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC009977.1-201ENST00000586015 570 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC005261.5-201ENST00000596280 355 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC087763.1-201ENST00000603391 286 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC055876.5-201ENST00000605667 259 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AP003400.3-201ENST00000624904 346 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 HSPA8P17-201ENST00000427029 1382 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC079097.1-201ENST00000512187 1399 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC004656.1-201ENST00000568479 4951 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AC117529.2-201ENST00000512159 2068 ntBASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.27□□□□□ -1.41
SYNGAP1Q96PV0 Y_RNA.25-201ENST00000362528 102 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 RNU6-582P-201ENST00000362989 107 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 Y_RNA.97-201ENST00000363094 102 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 SNORA62.2-201ENST00000364672 152 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 RNU6-533P-201ENST00000384144 107 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AL109941.1-201ENST00000401925 229 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AL009179.1-201ENST00000406085 265 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AC009237.10-201ENST00000414112 510 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 FCF1P2-201ENST00000415284 583 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 BOLA3P4-201ENST00000418151 400 ntBASIC6.26□□□□□ -1.41
SYNGAP1Q96PV0 RNF10P1-201ENST00000418589 369 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms