Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC005261.4-201ENST00000600047 1385 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 RPS4XP9-201ENST00000405151 780 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 RN7SKP33-201ENST00000410942 340 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 MRPL50P1-201ENST00000431951 384 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 NEK4P1-201ENST00000433383 879 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 TRIM60P18-201ENST00000441518 828 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC104308.1-201ENST00000454621 333 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC099563.1-201ENST00000456086 418 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC089999.1-201ENST00000460336 374 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC011276.1-201ENST00000469688 323 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC006511.1-201ENST00000470614 315 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC006463.2-201ENST00000473326 348 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 NPM1P17-201ENST00000479221 602 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 NDUFA5P12-201ENST00000503796 343 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 KCTD9P5-201ENST00000504141 1170 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC114967.1-201ENST00000504890 259 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 MTATP6P22-201ENST00000507369 598 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 PCBP2P3-201ENST00000509726 843 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 RPL12P22-201ENST00000519073 490 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC008489.1-201ENST00000524271 483 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 LLPHP1-201ENST00000603571 367 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AL163642.2-201ENST00000604722 1019 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 AC091167.4-201ENST00000605079 184 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 MIR3653-201ENST00000625572 110 ntBASIC2.77□□□□□ -1.97
AP1S3Q96PC3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
AP1S3Q96PC3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 CASC19-261ENST00000641853 1638 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 RNU6-398P-201ENST00000384143 109 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 MIR591-201ENST00000385290 95 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 SKINT1L-201ENST00000401057 817 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AL136116.1-201ENST00000403591 381 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 Z97055.1-201ENST00000419730 712 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC006989.1-201ENST00000427212 131 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 RPL35AP28-201ENST00000459730 331 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC010401.1-201ENST00000463867 348 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 RPS23P7-201ENST00000466210 444 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 RPL32P9-201ENST00000487963 407 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 RNA5SP380-201ENST00000517190 98 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 IGKV2D-19-201ENST00000523346 262 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC011602.1-201ENST00000546484 331 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC004024.1-201ENST00000549244 247 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC010735.1-201ENST00000567305 1026 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 MIR4506-201ENST00000584693 77 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC009948.4-201ENST00000604692 675 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AL356218.2-201ENST00000605264 187 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AL121890.3-201ENST00000618494 516 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 MIR6719-201ENST00000622428 87 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 RNF6P1-201ENST00000444889 1784 ntBASIC2.76□□□□□ -1.97
AP1S3Q96PC3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP1S3Q96PC3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.75□□□□□ -1.97
AP1S3Q96PC3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC2.75□□□□□ -1.97
AP1S3Q96PC3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
AP1S3Q96PC3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.75□□□□□ -1.97
AP1S3Q96PC3 RNA5SP383-201ENST00000362934 120 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms