Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 BMS1P19-201ENST00000433925 393 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 MRPS33P4-201ENST00000434892 317 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 TBCAP1-201ENST00000436520 327 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 AC083863.1-201ENST00000438811 231 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 RPL21P89-201ENST00000444021 467 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 RPS17P13-201ENST00000448974 407 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 HMGB3P21-201ENST00000452483 547 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 TPT1P3-201ENST00000492841 512 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 SUMO1P1-201ENST00000497904 306 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 HIGD1AP18-201ENST00000520730 278 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 OR8R1P-201ENST00000543943 764 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 AC092747.2-201ENST00000545069 983 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 AC120057.2-201ENST00000571520 271 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 MTATP6P25-201ENST00000574491 261 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 VN1R79P-201ENST00000593540 513 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 AC091167.4-201ENST00000605079 184 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 AL355816.1-201ENST00000607951 118 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 AL161637.1-201ENST00000622380 412 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 MIR6500-201ENST00000622700 86 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 AP006248.2-201ENST00000623309 592 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL21A1Q96P44 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL21A1Q96P44 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
COL21A1Q96P44 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL21A1Q96P44 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL21A1Q96P44 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 SAGE2P-201ENST00000420011 2126 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 AL589655.1-201ENST00000405398 482 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 PPIAP31-201ENST00000405422 495 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 RN7SKP263-201ENST00000411194 309 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 OR8F1P-201ENST00000425243 930 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 AC122718.1-201ENST00000439448 744 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 CDC27P1-201ENST00000445384 715 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 RPL34P26-201ENST00000445636 354 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 AC044797.1-201ENST00000445744 679 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 TPMTP4-201ENST00000450749 678 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 RPL21P11-201ENST00000461458 483 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 FAM133DP-201ENST00000464802 691 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 RPS3AP6-201ENST00000484430 795 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 RPL21P129-201ENST00000491732 478 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 USP9YP5-201ENST00000511770 630 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 RN7SKP21-201ENST00000516503 220 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 AL109741.3-201ENST00000561748 592 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 AC099489.2-201ENST00000574976 260 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL21A1Q96P44 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 AL606490.9-201ENST00000603331 271 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 ABI1P1-201ENST00000603375 1120 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 AL592436.1-201ENST00000605135 558 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 AL034351.1-201ENST00000605288 668 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 AC073111.2-201ENST00000605657 1075 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL21A1Q96P44 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL21A1Q96P44 CR381670.1-201ENST00000624291 1693 ntBASIC3.64□□□□□ -1.83
COL21A1Q96P44 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
COL21A1Q96P44 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.64□□□□□ -1.83
COL21A1Q96P44 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC006504.1-201ENST00000562493 3666 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL21A1Q96P44 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC007685.1-201ENST00000329806 452 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
COL21A1Q96P44 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 RNA5SP239-201ENST00000410218 129 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 RPL7P48-201ENST00000461513 746 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 RPS4XP15-201ENST00000489210 795 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC010460.1-201ENST00000507087 466 ntBASIC3.63□□□□□ -1.83
COL21A1Q96P44 AC021146.1-201ENST00000511202 716 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms