Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AL713922.2-201ENST00000619384 716 ntBASIC4.07□□□□□ -1.76
RPRD1AQ96P16 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.07□□□□□ -1.76
RPRD1AQ96P16 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 DCAF13P3-201ENST00000561147 1334 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 Y_RNA.126-201ENST00000363382 111 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 RNA5SP97-201ENST00000365006 84 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 RNU4-31P-201ENST00000384211 141 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 ZNF603P-201ENST00000405613 487 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 LINC01881-201ENST00000416103 412 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 RPS12P23-201ENST00000419579 400 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 ELOCP18-201ENST00000434209 337 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 RANP8-201ENST00000444720 713 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 TPMTP4-201ENST00000450749 678 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 RPL21P11-201ENST00000461458 483 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 RN7SL132P-201ENST00000478131 296 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 RPS3AP6-201ENST00000484430 795 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 RPS26P15-201ENST00000488067 348 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 YPEL5P3-201ENST00000547227 352 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 ZNF92P3-201ENST00000596594 954 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 AC110792.4-201ENST00000609843 298 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 AC103858.2-201ENST00000621471 543 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 CR392039.4-201ENST00000624968 501 ntBASIC4.06□□□□□ -1.76
RPRD1AQ96P16 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RPRD1AQ96P16 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 RN7SKP280-201ENST00000364196 304 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 RNU6-213P-201ENST00000384051 104 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 CCNB2P1-201ENST00000399411 1150 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 TRIM60P13-201ENST00000432350 1283 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 HMGB1P37-201ENST00000439613 609 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AL353093.1-201ENST00000441292 436 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 XKRY2-201ENST00000442362 1093 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 OR9M1P-201ENST00000459641 921 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AL672167.3-201ENST00000465951 960 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 MIR2114-201ENST00000516645 80 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 NDUFA5P2-201ENST00000519723 344 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 OR4C2P-201ENST00000530855 1064 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AP002812.4-201ENST00000532139 286 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AC106785.1-201ENST00000565935 262 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AP001180.3-201ENST00000582221 145 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 NF1P5-201ENST00000588287 448 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AC020914.4-201ENST00000597690 277 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 AC015726.1-201ENST00000602353 681 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 CDRT1-208ENST00000630868 794 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 MAPK10-253ENST00000641010 4072 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 LINC02471-203ENST00000641941 4752 ntBASIC4.05□□□□□ -1.76
RPRD1AQ96P16 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RPRD1AQ96P16 GTF2H2B-203ENST00000508065 1432 ntBASIC4.04□□□□□ -1.76
RPRD1AQ96P16 MTND4P10-201ENST00000446199 1363 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms