Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.9□□□□□ -1.78
RFT1Q96AA3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RFT1Q96AA3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RFT1Q96AA3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RFT1Q96AA3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.9□□□□□ -1.78
RFT1Q96AA3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RFT1Q96AA3 RARSP1-201ENST00000542842 1418 ntBASIC3.9□□□□□ -1.78
RFT1Q96AA3 AC010928.1-201ENST00000592477 1447 ntBASIC3.9□□□□□ -1.78
RFT1Q96AA3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFT1Q96AA3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFT1Q96AA3 RN7SKP269-201ENST00000365545 319 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 RNA5SP113-201ENST00000410486 84 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC004987.3-201ENST00000413879 771 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 RPS12P23-201ENST00000419579 400 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC092647.1-201ENST00000420654 287 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC234779.1-201ENST00000425910 285 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 OR4F13P-201ENST00000428478 931 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC010881.1-201ENST00000433830 235 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC016831.4-201ENST00000438302 307 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 GSTA7P-201ENST00000438425 448 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 RPS26P56-201ENST00000444468 240 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 VN1R32P-201ENST00000452234 905 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 OR2AF1P-201ENST00000454899 889 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC074386.1-201ENST00000476560 767 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC104982.1-201ENST00000478775 574 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 GAPDHP39-201ENST00000481866 979 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 HPRT1P1-201ENST00000509498 657 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 SNORA70.14-201ENST00000516205 110 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFT1Q96AA3 PTP4A1P6-201ENST00000531034 478 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 AL110118.1-201ENST00000553543 400 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFT1Q96AA3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 YWHAZP1-201ENST00000556286 722 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 BGLT3-201ENST00000564523 994 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 BNIP3P40-201ENST00000596017 556 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC244505.7-201ENST00000599675 272 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AL512782.1-201ENST00000603093 364 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 MIR432-201ENST00000606207 94 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC105429.2-201ENST00000610567 517 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 SDR42E1P1-201ENST00000611327 477 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC016769.4-201ENST00000616893 535 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 AC007546.2-201ENST00000623996 360 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RFT1Q96AA3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFT1Q96AA3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 ZNF33CP-201ENST00000432492 2030 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 DCAF13P3-201ENST00000561147 1334 ntBASIC3.9□□□□□ -1.79
RFT1Q96AA3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.9□□□□□ -1.79
RFT1Q96AA3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFT1Q96AA3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 AC018555.1-201ENST00000567548 1980 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 RNA5SP307-201ENST00000362863 116 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 RN7SKP149-201ENST00000363008 344 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 SNORA71.2-201ENST00000364941 134 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 RNU6-444P-201ENST00000383988 108 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 AC136624.1-201ENST00000400791 413 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 FABP12P1-201ENST00000401911 322 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 RNA5SP306-201ENST00000411087 107 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 VN1R51P-201ENST00000411675 945 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 AC009237.2-201ENST00000421358 284 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 AC005154.2-201ENST00000438110 379 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 DDX39BP2-208ENST00000453923 258 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 RPL6P9-201ENST00000466502 859 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.89□□□□□ -1.79
RFT1Q96AA3 AC017037.1-201ENST00000508460 471 ntBASIC3.89□□□□□ -1.79
RFT1Q96AA3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms