Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AC010653.1-201ENST00000571108 881 ntBASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AC233263.6-201ENST00000631132 1963 ntBASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 RN7SKP247-201ENST00000411094 308 ntBASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 MIR3922-201ENST00000585192 84 ntBASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC3.67□□□□□ -1.82
SHROOM3Q8TF72 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 ADAM3B-201ENST00000569937 840 ntBASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 MIR4325-201ENST00000583049 90 ntBASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SHROOM3Q8TF72 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 AL590609.2-201ENST00000421430 368 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 SDCBPP2-201ENST00000424643 885 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 AL035458.1-201ENST00000433096 585 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 SETD6P1-201ENST00000444575 317 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 AL121877.1-201ENST00000453704 622 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 RN7SL429P-201ENST00000479090 223 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 RN7SL489P-201ENST00000486185 223 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 RN7SL327P-201ENST00000488659 223 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 AL121576.1-201ENST00000556055 276 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 RN7SL853P-201ENST00000617250 223 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 AC241377.1-201ENST00000619797 406 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 AC006386.2-201ENST00000624491 75 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 AC012005.1-201ENST00000624575 75 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.65□□□□□ -1.82
SHROOM3Q8TF72 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 AC027287.1-201ENST00000553115 1453 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 RPL23AP57-201ENST00000332361 466 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 RNU6-301P-201ENST00000384277 107 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 HMGN2P8-201ENST00000391458 268 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 AL591419.1-201ENST00000427423 339 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 AC233982.1-201ENST00000451247 436 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 RPL21P8-201ENST00000465083 535 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 FTH1P24-201ENST00000503502 462 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 RNU6-964P-201ENST00000516524 69 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 IGHV3-32-201ENST00000519182 355 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 AL137843.1-201ENST00000605078 385 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 AL513477.2-201ENST00000607858 568 ntBASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHROOM3Q8TF72 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 USP8P1-201ENST00000494673 3183 ntBASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 RNU4-35P-201ENST00000362588 141 ntBASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 RNA5SP235-201ENST00000365411 114 ntBASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AL391417.1-201ENST00000404100 426 ntBASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AL139095.1-201ENST00000404326 391 ntBASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 Z98941.1-201ENST00000407764 100 ntBASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.64□□□□□ -1.83
SHROOM3Q8TF72 RPL5P24-201ENST00000463742 885 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms