Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 RNA5SP97-201ENST00000365006 84 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 RNA5SP235-201ENST00000365411 114 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 RNA5SP283-201ENST00000365604 119 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 MTCO3P31-201ENST00000405526 789 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 RPL21P65-201ENST00000406094 466 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AL691449.1-201ENST00000426570 421 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 METTL15P1-201ENST00000481421 1045 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AP002812.1-201ENST00000495378 474 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 RPL7P47-201ENST00000497299 556 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 FTH1P9-201ENST00000513251 355 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AP001636.2-201ENST00000525517 696 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AP000926.4-201ENST00000527351 454 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AL121766.1-201ENST00000547436 487 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AC034105.4-201ENST00000568304 277 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AP005901.4-201ENST00000577336 569 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AC053481.4-201ENST00000583164 216 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AC245389.1-201ENST00000605141 529 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AC090912.3-201ENST00000609775 533 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AL392048.1-201ENST00000613946 534 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 AL513302.2-201ENST00000562313 1842 ntBASIC4.05□□□□□ -1.76
CCDC112Q8NEF3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 RNA5SP42-201ENST00000364278 115 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 BX679664.1-201ENST00000434429 253 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AC074367.1-201ENST00000438685 1125 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 HMGB3P21-201ENST00000452483 547 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 SNORA84-201ENST00000459229 133 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 RN7SL442P-201ENST00000473804 320 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AP000893.1-201ENST00000474462 794 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AC091959.2-201ENST00000477363 321 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 TPT1P3-201ENST00000492841 512 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AC010460.1-201ENST00000507087 466 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 SAP18P1-201ENST00000512058 390 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 NPM1P35-201ENST00000533043 868 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AL389895.1-201ENST00000554127 252 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 RN7SL600P-201ENST00000581811 299 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 BNIP3P22-201ENST00000593399 556 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 MIR6867-201ENST00000610636 67 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AL356863.1-201ENST00000623378 1080 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AC020978.9-201ENST00000624380 1141 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AF001550.2-201ENST00000636643 217 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AL445437.1-201ENST00000623157 3087 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 AC066616.2-201ENST00000559334 1481 ntBASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CCDC112Q8NEF3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 XIAPP3-201ENST00000312918 795 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 MIR30E-201ENST00000362104 92 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 MIR372-201ENST00000362225 67 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 RNA5SP130-201ENST00000364431 114 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 RNU4-7P-201ENST00000364758 141 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 RPS7P13-201ENST00000413955 498 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AL356276.2-201ENST00000435919 558 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 RPL7P31-201ENST00000450192 724 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 SNORD116-26-201ENST00000516006 96 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AC008011.1-201ENST00000545989 227 ntBASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC112Q8NEF3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms