Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 MIR3682-201ENST00000581338 84 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC008638.3-201ENST00000603341 463 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC011816.2-201ENST00000607089 556 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AL021918.2-201ENST00000613415 194 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC005899.7-201ENST00000618199 588 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC006600.2-201ENST00000624834 2506 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AL161756.3-201ENST00000641216 2071 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF43Q68DV7 AC091046.3-201ENST00000631455 1574 ntBASIC6.09□□□□□ -1.43
RNF43Q68DV7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RNF43Q68DV7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
RNF43Q68DV7 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
RNF43Q68DV7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RNF43Q68DV7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RNF43Q68DV7 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RNF43Q68DV7 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 DNM1P47-203ENST00000571780 12667 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 OR4A15-201ENST00000314706 1035 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 MIR369-201ENST00000362155 70 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 RNU6-1339P-201ENST00000363574 91 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 Y_RNA.384-201ENST00000383909 102 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 RNU6-784P-201ENST00000384330 106 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 RNU6-809P-201ENST00000384461 107 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 MIR16-1-201ENST00000385271 89 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 U3.23-201ENST00000391132 200 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 RNU4-34P-201ENST00000410431 124 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 Y_RNA.605-201ENST00000410577 105 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 RNU2-39P-201ENST00000410604 198 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 DSTNP5-201ENST00000427921 523 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 AL583843.1-201ENST00000456070 346 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 HSPE1P22-201ENST00000456856 327 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 PFN1P6-201ENST00000476786 399 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC090096.1-201ENST00000489168 390 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 RN7SL466P-201ENST00000497546 295 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC093809.1-201ENST00000509155 340 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 RNU6-1170P-201ENST00000515974 106 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 HMGN2P36-201ENST00000529541 409 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 AL390726.5-202ENST00000564800 256 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC245014.2-201ENST00000603689 287 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC104695.2-201ENST00000605056 775 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC246785.4-201ENST00000605374 287 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC145423.1-201ENST00000605712 336 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC004908.2-201ENST00000609090 574 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 AC068831.8-201ENST00000620171 435 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 MIR193BHG-214ENST00000641765 509 ntBASIC6.08□□□□□ -1.44
RNF43Q68DV7 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RNF43Q68DV7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms