Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX1Q15475 AC122134.1-201ENST00000565664 1104 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX1Q15475 MIR3939-201ENST00000582614 106 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC090330.1-201ENST00000588646 764 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX1Q15475 IPO5P1-202ENST00000600039 287 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC079610.2-201ENST00000604818 690 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC245100.7-201ENST00000609678 442 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC023043.4-201ENST00000612081 449 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC011472.4-201ENST00000615848 491 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC078880.5-201ENST00000617845 421 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX1Q15475 AC090772.4-201ENST00000623599 362 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AL356118.1-201ENST00000635272 1078 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC244205.2-202ENST00000635781 342 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SIX1Q15475 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX1Q15475 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SIX1Q15475 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX1Q15475 AP000756.2-201ENST00000624168 2567 ntBASIC4.01□□□□□ -1.77
SIX1Q15475 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX1Q15475 CR381670.1-201ENST00000624291 1693 ntBASIC4□□□□□ -1.77
SIX1Q15475 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4□□□□□ -1.77
SIX1Q15475 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIX1Q15475 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4□□□□□ -1.77
SIX1Q15475 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIX1Q15475 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4□□□□□ -1.77
SIX1Q15475 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIX1Q15475 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4□□□□□ -1.77
SIX1Q15475 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4□□□□□ -1.77
SIX1Q15475 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4□□□□□ -1.77
SIX1Q15475 RNU6-666P-201ENST00000363499 107 ntBASIC4□□□□□ -1.77
SIX1Q15475 SNORD56.4-201ENST00000363883 71 ntBASIC4□□□□□ -1.77
SIX1Q15475 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SIX1Q15475 RNU6-468P-201ENST00000384003 109 ntBASIC4□□□□□ -1.77
SIX1Q15475 HSPE1P8-201ENST00000406997 288 ntBASIC4□□□□□ -1.77
SIX1Q15475 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX1Q15475 LINC01347-201ENST00000417964 355 ntBASIC4□□□□□ -1.77
SIX1Q15475 DPY19L1P2-201ENST00000426647 915 ntBASIC4□□□□□ -1.77
SIX1Q15475 AC005189.1-201ENST00000431286 310 ntBASIC4□□□□□ -1.77
SIX1Q15475 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX1Q15475 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4□□□□□ -1.77
SIX1Q15475 SKP1P1-201ENST00000438081 489 ntBASIC4□□□□□ -1.77
SIX1Q15475 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4□□□□□ -1.77
SIX1Q15475 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4□□□□□ -1.77
SIX1Q15475 HMGB1P26-201ENST00000452520 628 ntBASIC4□□□□□ -1.77
SIX1Q15475 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4□□□□□ -1.77
SIX1Q15475 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4□□□□□ -1.77
SIX1Q15475 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4□□□□□ -1.77
SIX1Q15475 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4□□□□□ -1.77
SIX1Q15475 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4□□□□□ -1.77
SIX1Q15475 RAC1P2-201ENST00000511164 579 ntBASIC4□□□□□ -1.77
SIX1Q15475 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4□□□□□ -1.77
SIX1Q15475 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4□□□□□ -1.77
SIX1Q15475 AC008802.1-201ENST00000519121 791 ntBASIC4□□□□□ -1.77
SIX1Q15475 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4□□□□□ -1.77
SIX1Q15475 AP003066.2-201ENST00000529375 555 ntBASIC4□□□□□ -1.77
SIX1Q15475 NPM1P35-201ENST00000533043 868 ntBASIC4□□□□□ -1.77
SIX1Q15475 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4□□□□□ -1.77
SIX1Q15475 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4□□□□□ -1.77
SIX1Q15475 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4□□□□□ -1.77
SIX1Q15475 BNIP3P40-201ENST00000596017 556 ntBASIC4□□□□□ -1.77
SIX1Q15475 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4□□□□□ -1.77
SIX1Q15475 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4□□□□□ -1.77
SIX1Q15475 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4□□□□□ -1.77
SIX1Q15475 AL137849.1-201ENST00000604767 169 ntBASIC4□□□□□ -1.77
SIX1Q15475 AC011374.2-201ENST00000607135 526 ntBASIC4□□□□□ -1.77
SIX1Q15475 VN1R9P-201ENST00000614184 867 ntBASIC4□□□□□ -1.77
SIX1Q15475 RMST_10.1-201ENST00000616309 154 ntBASIC4□□□□□ -1.77
SIX1Q15475 AC131238.1-201ENST00000617135 328 ntBASIC4□□□□□ -1.77
SIX1Q15475 AC145207.9-201ENST00000623802 325 ntBASIC4□□□□□ -1.77
SIX1Q15475 AC024023.1-201ENST00000624530 922 ntBASIC4□□□□□ -1.77
SIX1Q15475 DDX18P3-201ENST00000404856 2007 ntBASIC4□□□□□ -1.77
SIX1Q15475 AC009951.1-201ENST00000623674 2614 ntBASIC4□□□□□ -1.77
SIX1Q15475 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4□□□□□ -1.77
SIX1Q15475 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
SIX1Q15475 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SIX1Q15475 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
SIX1Q15475 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SIX1Q15475 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX1Q15475 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
SIX1Q15475 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SIX1Q15475 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX1Q15475 MIR320B1-201ENST00000390209 79 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SIX1Q15475 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SIX1Q15475 RNA5SP498-201ENST00000411342 120 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.99□□□□□ -1.77
SIX1Q15475 AC008173.1-201ENST00000418901 264 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.99□□□□□ -1.77
SIX1Q15475 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX1Q15475 OR5AW1P-201ENST00000426334 1006 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX1Q15475 FO393414.1-201ENST00000428697 1184 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.99□□□□□ -1.77
SIX1Q15475 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 MTCO1P52-201ENST00000433928 531 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 SNORA71B-202ENST00000439232 272 ntBASIC3.99□□□□□ -1.77
SIX1Q15475 HMGB3P9-201ENST00000441799 583 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms