Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 AL136131.1-201ENST00000406079 803 ntBASIC4.3□□□□□ -1.72
CACNA1SQ13698 IFNNP1-201ENST00000429219 553 ntBASIC4.3□□□□□ -1.72
CACNA1SQ13698 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 FCF1P8-201ENST00000510322 597 ntBASIC4.3□□□□□ -1.72
CACNA1SQ13698 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1SQ13698 Z82217.1-201ENST00000625157 8149 ntBASIC4.3□□□□□ -1.72
CACNA1SQ13698 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1SQ13698 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1SQ13698 AC007656.2-201ENST00000624902 4547 ntBASIC4.3□□□□□ -1.72
CACNA1SQ13698 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1SQ13698 RNU4-44P-201ENST00000363050 141 ntBASIC4.3□□□□□ -1.72
CACNA1SQ13698 RPS15AP29-201ENST00000445539 400 ntBASIC4.3□□□□□ -1.72
CACNA1SQ13698 RPS4XP2-201ENST00000458402 793 ntBASIC4.3□□□□□ -1.72
CACNA1SQ13698 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.3□□□□□ -1.72
CACNA1SQ13698 AC008489.1-201ENST00000524271 483 ntBASIC4.3□□□□□ -1.72
CACNA1SQ13698 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CACNA1SQ13698 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1SQ13698 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1SQ13698 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 AC017007.4-201ENST00000503353 1352 ntBASIC4.29□□□□□ -1.72
CACNA1SQ13698 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1SQ13698 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1SQ13698 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 UBE2V1P1-201ENST00000430836 445 ntBASIC4.29□□□□□ -1.72
CACNA1SQ13698 BX119904.1-201ENST00000432026 348 ntBASIC4.29□□□□□ -1.72
CACNA1SQ13698 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 NPM1P48-201ENST00000436002 853 ntBASIC4.29□□□□□ -1.72
CACNA1SQ13698 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 U3.44-201ENST00000458938 192 ntBASIC4.29□□□□□ -1.72
CACNA1SQ13698 RN7SL504P-201ENST00000494496 287 ntBASIC4.29□□□□□ -1.72
CACNA1SQ13698 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1SQ13698 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1SQ13698 AC018555.1-201ENST00000567548 1980 ntBASIC4.29□□□□□ -1.72
CACNA1SQ13698 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1SQ13698 AL022311.1-201ENST00000623726 19416 ntBASIC4.29□□□□□ -1.72
CACNA1SQ13698 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNA1SQ13698 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
CACNA1SQ13698 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CACNA1SQ13698 ANKRD36P1-201ENST00000344424 659 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 RNU1-18P-201ENST00000363062 164 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 RPS24P12-201ENST00000402084 394 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 MTHFD2P2-201ENST00000407725 247 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CACNA1SQ13698 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 AL356535.1-201ENST00000440335 398 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 AC018442.3-201ENST00000523025 183 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CACNA1SQ13698 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CACNA1SQ13698 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CACNA1SQ13698 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CACNA1SQ13698 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 AC092447.2-201ENST00000435487 669 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 MTND6P5-201ENST00000448266 512 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 AC099563.1-201ENST00000456086 418 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 RPL21P8-201ENST00000465083 535 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 AC069499.1-201ENST00000489433 509 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 RNU6-579P-201ENST00000516879 102 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.28□□□□□ -1.72
CACNA1SQ13698 AP000859.1-201ENST00000525536 307 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CACNA1SQ13698 AC022149.2-201ENST00000621061 203 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 AC119674.1-212ENST00000641155 993 ntBASIC4.28□□□□□ -1.72
CACNA1SQ13698 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.27□□□□□ -1.73
CACNA1SQ13698 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CACNA1SQ13698 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CACNA1SQ13698 AC093719.1-202ENST00000392735 373 ntBASIC4.27□□□□□ -1.73
CACNA1SQ13698 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.27□□□□□ -1.73
CACNA1SQ13698 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.27□□□□□ -1.73
CACNA1SQ13698 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.27□□□□□ -1.73
CACNA1SQ13698 CR383656.14-201ENST00000551951 406 ntBASIC4.27□□□□□ -1.73
CACNA1SQ13698 AP005205.1-201ENST00000563503 508 ntBASIC4.27□□□□□ -1.73
CACNA1SQ13698 AC006539.2-201ENST00000601729 572 ntBASIC4.27□□□□□ -1.73
CACNA1SQ13698 AC116312.1-201ENST00000606841 314 ntBASIC4.27□□□□□ -1.73
CACNA1SQ13698 AP003355.3-201ENST00000623465 114 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms