Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RAE1P78406 AC016716.1-201ENST00000265882 708 ntBASIC4.57□□□□□ -1.68
RAE1P78406 RNA5SP305-201ENST00000362665 119 ntBASIC4.57□□□□□ -1.68
RAE1P78406 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RAE1P78406 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RAE1P78406 U3.30-201ENST00000391308 210 ntBASIC4.57□□□□□ -1.68
RAE1P78406 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RAE1P78406 AL359643.1-201ENST00000404109 423 ntBASIC4.57□□□□□ -1.68
RAE1P78406 USP9YP33-201ENST00000412220 421 ntBASIC4.57□□□□□ -1.68
RAE1P78406 PRELID3BP11-201ENST00000414230 479 ntBASIC4.57□□□□□ -1.68
RAE1P78406 MTCYBP38-201ENST00000417160 1123 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.57□□□□□ -1.68
RAE1P78406 LINC00993-201ENST00000420453 540 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AC099336.2-201ENST00000422457 254 ntBASIC4.57□□□□□ -1.68
RAE1P78406 FABP7P2-201ENST00000429946 379 ntBASIC4.57□□□□□ -1.68
RAE1P78406 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.57□□□□□ -1.68
RAE1P78406 RPL37P1-201ENST00000432310 284 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.57□□□□□ -1.68
RAE1P78406 KCTD10P1-201ENST00000434203 625 ntBASIC4.57□□□□□ -1.68
RAE1P78406 USP9YP35-201ENST00000435696 412 ntBASIC4.57□□□□□ -1.68
RAE1P78406 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.57□□□□□ -1.68
RAE1P78406 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.57□□□□□ -1.68
RAE1P78406 SLC31A1P1-201ENST00000451221 567 ntBASIC4.57□□□□□ -1.68
RAE1P78406 VN1R32P-201ENST00000452234 905 ntBASIC4.57□□□□□ -1.68
RAE1P78406 RPL10P17-201ENST00000453852 316 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AC099560.2-201ENST00000457554 255 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AC006511.1-201ENST00000470614 315 ntBASIC4.57□□□□□ -1.68
RAE1P78406 RPSAP50-201ENST00000481955 852 ntBASIC4.57□□□□□ -1.68
RAE1P78406 RN7SL629P-201ENST00000489622 285 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AL024509.2-201ENST00000493462 493 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AC010424.1-201ENST00000506336 297 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.57□□□□□ -1.68
RAE1P78406 KRT19P6-201ENST00000510983 209 ntBASIC4.57□□□□□ -1.68
RAE1P78406 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RAE1P78406 MTCO2P32-201ENST00000514865 403 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.57□□□□□ -1.68
RAE1P78406 Y_RNA.695-201ENST00000516715 107 ntBASIC4.57□□□□□ -1.68
RAE1P78406 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RAE1P78406 OR5M2P-201ENST00000529003 936 ntBASIC4.57□□□□□ -1.68
RAE1P78406 OR10G5P-201ENST00000532733 358 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AC092851.1-201ENST00000535964 478 ntBASIC4.57□□□□□ -1.68
RAE1P78406 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.57□□□□□ -1.68
RAE1P78406 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.57□□□□□ -1.68
RAE1P78406 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.57□□□□□ -1.68
RAE1P78406 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.57□□□□□ -1.68
RAE1P78406 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.57□□□□□ -1.68
RAE1P78406 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.57□□□□□ -1.68
RAE1P78406 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.57□□□□□ -1.68
RAE1P78406 RSL24D1P11-201ENST00000591045 491 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AC020914.6-201ENST00000594327 272 ntBASIC4.57□□□□□ -1.68
RAE1P78406 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.57□□□□□ -1.68
RAE1P78406 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.57□□□□□ -1.68
RAE1P78406 AC092354.1-201ENST00000606057 376 ntBASIC4.57□□□□□ -1.68
RAE1P78406 RN7SKP299-201ENST00000606679 301 ntBASIC4.57□□□□□ -1.68
RAE1P78406 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.57□□□□□ -1.68
RAE1P78406 AL133243.1-201ENST00000614487 366 ntBASIC4.57□□□□□ -1.68
RAE1P78406 MIR7844-201ENST00000616161 122 ntBASIC4.57□□□□□ -1.68
RAE1P78406 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.57□□□□□ -1.68
RAE1P78406 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.57□□□□□ -1.68
RAE1P78406 AC090017.1-201ENST00000548612 1779 ntBASIC4.57□□□□□ -1.68
RAE1P78406 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RAE1P78406 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RAE1P78406 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
RAE1P78406 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
RAE1P78406 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RAE1P78406 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RAE1P78406 KARSP3-201ENST00000571212 1504 ntBASIC4.56□□□□□ -1.68
RAE1P78406 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RAE1P78406 Z95331.1-201ENST00000623075 23112 ntBASIC4.56□□□□□ -1.68
RAE1P78406 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.56□□□□□ -1.68
RAE1P78406 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 AL672167.1-205ENST00000641112 3080 ntBASIC4.56□□□□□ -1.68
RAE1P78406 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 RNA5SP123-201ENST00000363244 119 ntBASIC4.56□□□□□ -1.68
RAE1P78406 RNU6-1122P-201ENST00000384449 107 ntBASIC4.56□□□□□ -1.68
RAE1P78406 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAE1P78406 AL450338.1-201ENST00000407987 512 ntBASIC4.56□□□□□ -1.68
RAE1P78406 RPL6P29-201ENST00000414863 865 ntBASIC4.56□□□□□ -1.68
RAE1P78406 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.56□□□□□ -1.68
RAE1P78406 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.56□□□□□ -1.68
RAE1P78406 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.56□□□□□ -1.68
RAE1P78406 RBMY2QP-201ENST00000429799 1147 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.56□□□□□ -1.68
RAE1P78406 AL353706.1-201ENST00000436728 494 ntBASIC4.56□□□□□ -1.68
RAE1P78406 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.56□□□□□ -1.68
RAE1P78406 MTND1P30-201ENST00000441241 901 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AC112498.1-201ENST00000444401 332 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.56□□□□□ -1.68
RAE1P78406 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.56□□□□□ -1.68
RAE1P78406 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.56□□□□□ -1.68
RAE1P78406 HMGN3P1-201ENST00000453847 193 ntBASIC4.56□□□□□ -1.68
RAE1P78406 USP9YP10-201ENST00000454868 628 ntBASIC4.56□□□□□ -1.68
RAE1P78406 RPL18AP17-201ENST00000455326 198 ntBASIC4.56□□□□□ -1.68
RAE1P78406 NDUFA12P1-201ENST00000455914 406 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AL445433.1-201ENST00000457507 257 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AC108751.2-201ENST00000469993 231 ntBASIC4.56□□□□□ -1.68
RAE1P78406 AC108078.3-201ENST00000502633 489 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms