Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH12P55289 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDH12P55289 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CDH12P55289 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH12P55289 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH12P55289 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CDH12P55289 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH12P55289 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH12P55289 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH12P55289 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH12P55289 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH12P55289 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH12P55289 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH12P55289 RN7SKP104-201ENST00000362605 328 ntBASIC4.34□□□□□ -1.71
CDH12P55289 RNA5SP305-201ENST00000362665 119 ntBASIC4.34□□□□□ -1.71
CDH12P55289 RNU6-1066P-201ENST00000363573 105 ntBASIC4.34□□□□□ -1.71
CDH12P55289 Y_RNA.311-201ENST00000365068 96 ntBASIC4.34□□□□□ -1.71
CDH12P55289 U3.30-201ENST00000391308 210 ntBASIC4.34□□□□□ -1.71
CDH12P55289 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH12P55289 RN7SKP229-201ENST00000410465 302 ntBASIC4.34□□□□□ -1.71
CDH12P55289 RN7SKP182-201ENST00000410772 298 ntBASIC4.34□□□□□ -1.71
CDH12P55289 VDAC1P9-201ENST00000412766 841 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 AC114755.2-201ENST00000413520 361 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH12P55289 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 AC007394.1-201ENST00000421941 531 ntBASIC4.34□□□□□ -1.71
CDH12P55289 RPS26P40-201ENST00000435209 294 ntBASIC4.34□□□□□ -1.71
CDH12P55289 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 ELOCP10-201ENST00000440624 327 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH12P55289 AC112498.1-201ENST00000444401 332 ntBASIC4.34□□□□□ -1.71
CDH12P55289 MTND1P29-201ENST00000448112 647 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH12P55289 AL034418.1-201ENST00000448675 860 ntBASIC4.34□□□□□ -1.71
CDH12P55289 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH12P55289 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
CDH12P55289 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 AC104689.1-201ENST00000473356 768 ntBASIC4.34□□□□□ -1.71
CDH12P55289 RN7SL41P-201ENST00000476144 297 ntBASIC4.34□□□□□ -1.71
CDH12P55289 RPSAP50-201ENST00000481955 852 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 HNRNPKP5-201ENST00000515300 253 ntBASIC4.34□□□□□ -1.71
CDH12P55289 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 AP001207.1-201ENST00000524051 481 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
CDH12P55289 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CDH12P55289 AC133555.2-201ENST00000550213 292 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH12P55289 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH12P55289 NBR2-204ENST00000587322 63 ntBASIC4.34□□□□□ -1.71
CDH12P55289 PSMA6P4-201ENST00000603247 718 ntBASIC4.34□□□□□ -1.71
CDH12P55289 ELOCP34-201ENST00000604436 327 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH12P55289 AC004223.4-201ENST00000612426 332 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AL512624.1-201ENST00000613638 469 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AC091905.4-201ENST00000623432 202 ntBASIC4.34□□□□□ -1.71
CDH12P55289 AC091931.1-201ENST00000623488 728 ntBASIC4.34□□□□□ -1.71
CDH12P55289 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH12P55289 AP003072.4-201ENST00000624580 310 ntBASIC4.34□□□□□ -1.71
CDH12P55289 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH12P55289 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH12P55289 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
CDH12P55289 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CDH12P55289 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.34□□□□□ -1.72
CDH12P55289 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDH12P55289 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDH12P55289 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.34□□□□□ -1.72
CDH12P55289 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH12P55289 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
CDH12P55289 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH12P55289 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH12P55289 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CDH12P55289 AC134882.1-201ENST00000603738 1676 ntBASIC4.33□□□□□ -1.72
CDH12P55289 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH12P55289 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH12P55289 AL445523.1-201ENST00000451184 1362 ntBASIC4.33□□□□□ -1.72
CDH12P55289 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CDH12P55289 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH12P55289 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH12P55289 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH12P55289 SUGT1P1-201ENST00000379514 476 ntBASIC4.33□□□□□ -1.72
CDH12P55289 RNU1-82P-201ENST00000390851 165 ntBASIC4.33□□□□□ -1.72
CDH12P55289 AL590762.2-201ENST00000395798 571 ntBASIC4.33□□□□□ -1.72
CDH12P55289 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH12P55289 AL589647.1-201ENST00000402485 466 ntBASIC4.33□□□□□ -1.72
CDH12P55289 AC068533.2-201ENST00000411872 306 ntBASIC4.33□□□□□ -1.72
CDH12P55289 AL136133.1-201ENST00000413694 376 ntBASIC4.33□□□□□ -1.72
CDH12P55289 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH12P55289 AC019178.2-201ENST00000423595 505 ntBASIC4.33□□□□□ -1.72
CDH12P55289 AL022400.1-201ENST00000423946 935 ntBASIC4.33□□□□□ -1.72
CDH12P55289 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH12P55289 AL450263.2-201ENST00000439400 589 ntBASIC4.33□□□□□ -1.72
CDH12P55289 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms