Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SNX5P1-201ENST00000505757 1041 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AC018710.1-201ENST00000506509 158 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.61□□□□□ -1.51
EPHB3P54753 EIF3KP3-201ENST00000514461 639 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 Y_RNA.675-201ENST00000516389 149 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 RNA5SP373-201ENST00000517271 95 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.61□□□□□ -1.51
EPHB3P54753 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.61□□□□□ -1.51
EPHB3P54753 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.61□□□□□ -1.51
EPHB3P54753 GTF2IP8-201ENST00000560687 584 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.61□□□□□ -1.51
EPHB3P54753 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.61□□□□□ -1.51
EPHB3P54753 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
EPHB3P54753 AC010928.3-201ENST00000587712 541 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.61□□□□□ -1.51
EPHB3P54753 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AC024940.4-201ENST00000605507 246 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.61□□□□□ -1.51
EPHB3P54753 AC002550.2-201ENST00000621246 394 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 uc_338.7-201ENST00000621834 124 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
EPHB3P54753 AC015871.5-202ENST00000623252 701 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AC099494.2-201ENST00000623371 978 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 AP003400.3-201ENST00000624904 346 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 ATE1-AS1-202ENST00000636460 506 ntBASIC5.61□□□□□ -1.51
EPHB3P54753 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
EPHB3P54753 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
EPHB3P54753 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
EPHB3P54753 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
EPHB3P54753 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
EPHB3P54753 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
EPHB3P54753 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
EPHB3P54753 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.6□□□□□ -1.51
EPHB3P54753 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.6□□□□□ -1.51
EPHB3P54753 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
EPHB3P54753 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
EPHB3P54753 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
EPHB3P54753 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
EPHB3P54753 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
EPHB3P54753 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
EPHB3P54753 MSL3P1-202ENST00000440028 1468 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
EPHB3P54753 AC003973.3-201ENST00000624863 2822 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
EPHB3P54753 RNU6-433P-201ENST00000363216 104 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 MIR550A3-201ENST00000390735 95 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 DBIP1-201ENST00000401435 260 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.6□□□□□ -1.51
EPHB3P54753 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.6□□□□□ -1.51
EPHB3P54753 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
EPHB3P54753 AC093698.1-201ENST00000423843 571 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 AL590399.2-201ENST00000427536 309 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.6□□□□□ -1.51
EPHB3P54753 RPS23P9-201ENST00000448848 438 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 AC104634.1-201ENST00000452720 462 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 snoU109.1-201ENST00000459339 135 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 AC073522.1-201ENST00000483312 377 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 SETP14-201ENST00000497538 873 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.6□□□□□ -1.51
EPHB3P54753 NDUFB5P1-201ENST00000508134 564 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.6□□□□□ -1.51
EPHB3P54753 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.6□□□□□ -1.51
EPHB3P54753 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.6□□□□□ -1.51
EPHB3P54753 AF235103.2-201ENST00000525753 346 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 FAM92A1P1-201ENST00000528023 890 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 AP000676.2-201ENST00000529711 301 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.6□□□□□ -1.51
EPHB3P54753 AC092490.3-201ENST00000545370 572 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.6□□□□□ -1.51
EPHB3P54753 AC009027.1-201ENST00000604510 479 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 AC009597.2-201ENST00000604659 592 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
EPHB3P54753 AC006840.1-201ENST00000623069 542 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.6□□□□□ -1.51
EPHB3P54753 CRYM-AS1-204ENST00000637983 556 ntBASIC5.6□□□□□ -1.51
EPHB3P54753 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
EPHB3P54753 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
EPHB3P54753 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.6□□□□□ -1.51
EPHB3P54753 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.6□□□□□ -1.51
EPHB3P54753 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
EPHB3P54753 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
EPHB3P54753 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
EPHB3P54753 AP002512.4-202ENST00000641599 4530 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.59□□□□□ -1.51
EPHB3P54753 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.59□□□□□ -1.51
EPHB3P54753 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.59□□□□□ -1.51
EPHB3P54753 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
EPHB3P54753 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
EPHB3P54753 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
EPHB3P54753 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.59□□□□□ -1.51
EPHB3P54753 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
EPHB3P54753 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
EPHB3P54753 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.59□□□□□ -1.51
EPHB3P54753 RNU5E-5P-201ENST00000365379 116 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms