Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.86□□□□□ -1.47
PMS1P54277 AC104985.2-201ENST00000620598 500 ntBASIC5.86□□□□□ -1.47
PMS1P54277 MIR6863-201ENST00000636112 90 ntBASIC5.86□□□□□ -1.47
PMS1P54277 FAM157B-203ENST00000639350 358 ntBASIC5.86□□□□□ -1.47
PMS1P54277 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PMS1P54277 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PMS1P54277 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PMS1P54277 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PMS1P54277 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PMS1P54277 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.85□□□□□ -1.47
PMS1P54277 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PMS1P54277 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PMS1P54277 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PMS1P54277 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.85□□□□□ -1.47
PMS1P54277 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.85□□□□□ -1.47
PMS1P54277 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PMS1P54277 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.85□□□□□ -1.47
PMS1P54277 TCP11X1-202ENST00000622971 1372 ntBASIC5.85□□□□□ -1.47
PMS1P54277 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.85□□□□□ -1.47
PMS1P54277 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PMS1P54277 RNU6-533P-201ENST00000384144 107 ntBASIC5.85□□□□□ -1.47
PMS1P54277 Y_RNA.453-201ENST00000384223 109 ntBASIC5.85□□□□□ -1.47
PMS1P54277 RNU6-809P-201ENST00000384461 107 ntBASIC5.85□□□□□ -1.47
PMS1P54277 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PMS1P54277 SNORA48.4-201ENST00000391089 134 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AL031985.1-201ENST00000392713 418 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AL121972.1-201ENST00000402023 252 ntBASIC5.85□□□□□ -1.47
PMS1P54277 MIR320C1-201ENST00000408566 88 ntBASIC5.85□□□□□ -1.47
PMS1P54277 RPS3AP3-201ENST00000411933 242 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.85□□□□□ -1.47
PMS1P54277 MTCYBP24-201ENST00000420387 1106 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.85□□□□□ -1.47
PMS1P54277 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.85□□□□□ -1.47
PMS1P54277 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.85□□□□□ -1.47
PMS1P54277 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.85□□□□□ -1.47
PMS1P54277 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.85□□□□□ -1.47
PMS1P54277 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.85□□□□□ -1.47
PMS1P54277 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PMS1P54277 AC010881.1-201ENST00000433830 235 ntBASIC5.85□□□□□ -1.47
PMS1P54277 SKP1P1-201ENST00000438081 489 ntBASIC5.85□□□□□ -1.47
PMS1P54277 SNRPEP7-201ENST00000438350 220 ntBASIC5.85□□□□□ -1.47
PMS1P54277 SNRPEP8-201ENST00000442866 260 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AL161636.2-201ENST00000445179 927 ntBASIC5.85□□□□□ -1.47
PMS1P54277 MTND5P20-201ENST00000448677 143 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC106872.3-201ENST00000495104 446 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.85□□□□□ -1.47
PMS1P54277 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.85□□□□□ -1.47
PMS1P54277 AC098976.1-201ENST00000513014 541 ntBASIC5.85□□□□□ -1.47
PMS1P54277 Y_RNA.702-201ENST00000516843 96 ntBASIC5.85□□□□□ -1.47
PMS1P54277 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.85□□□□□ -1.47
PMS1P54277 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PMS1P54277 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.85□□□□□ -1.47
PMS1P54277 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.85□□□□□ -1.47
PMS1P54277 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.85□□□□□ -1.47
PMS1P54277 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.85□□□□□ -1.47
PMS1P54277 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.85□□□□□ -1.47
PMS1P54277 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.85□□□□□ -1.47
PMS1P54277 AC019322.1-201ENST00000571869 389 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC008521.2-201ENST00000591021 259 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC008687.2-201ENST00000597865 520 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AP000907.4-201ENST00000604143 237 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC104695.2-201ENST00000605056 775 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC010200.2-201ENST00000605098 235 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC006338.1-201ENST00000618453 749 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC127024.6-201ENST00000621598 424 ntBASIC5.85□□□□□ -1.47
PMS1P54277 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.85□□□□□ -1.47
PMS1P54277 AC073136.1-201ENST00000449426 2884 ntBASIC5.85□□□□□ -1.47
PMS1P54277 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PMS1P54277 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PMS1P54277 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PMS1P54277 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PMS1P54277 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PMS1P54277 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PMS1P54277 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.84□□□□□ -1.47
PMS1P54277 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.84□□□□□ -1.47
PMS1P54277 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.84□□□□□ -1.47
PMS1P54277 AC125336.1-201ENST00000508893 2827 ntBASIC5.84□□□□□ -1.47
PMS1P54277 OR4A15-201ENST00000314706 1035 ntBASIC5.84□□□□□ -1.47
PMS1P54277 RNU1-19P-201ENST00000363306 165 ntBASIC5.84□□□□□ -1.47
PMS1P54277 RN7SKP124-201ENST00000364730 341 ntBASIC5.84□□□□□ -1.47
PMS1P54277 RNA5SP187-201ENST00000384400 119 ntBASIC5.84□□□□□ -1.47
PMS1P54277 MIR621-201ENST00000384919 96 ntBASIC5.84□□□□□ -1.47
PMS1P54277 MIR589-201ENST00000385238 99 ntBASIC5.84□□□□□ -1.47
PMS1P54277 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PMS1P54277 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PMS1P54277 RPS3AP36-201ENST00000398190 775 ntBASIC5.84□□□□□ -1.47
PMS1P54277 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.84□□□□□ -1.47
PMS1P54277 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.84□□□□□ -1.47
PMS1P54277 AP000534.2-201ENST00000412729 568 ntBASIC5.84□□□□□ -1.47
PMS1P54277 COX5BP7-201ENST00000414780 274 ntBASIC5.84□□□□□ -1.47
PMS1P54277 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.84□□□□□ -1.47
PMS1P54277 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.84□□□□□ -1.47
PMS1P54277 RPL7P30-201ENST00000420888 709 ntBASIC5.84□□□□□ -1.47
PMS1P54277 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.84□□□□□ -1.47
PMS1P54277 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.84□□□□□ -1.47
PMS1P54277 VTI1BP4-201ENST00000427516 527 ntBASIC5.84□□□□□ -1.47
PMS1P54277 MTND3P23-201ENST00000431980 347 ntBASIC5.84□□□□□ -1.47
PMS1P54277 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.84□□□□□ -1.47
PMS1P54277 PPIAP13-201ENST00000434706 478 ntBASIC5.84□□□□□ -1.47
PMS1P54277 LSM1P1-201ENST00000438629 273 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms