Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.33□□□□□ -1.88
SRP9P49458 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SRP9P49458 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SRP9P49458 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SRP9P49458 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.32□□□□□ -1.88
SRP9P49458 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.32□□□□□ -1.88
SRP9P49458 RPL30P3-201ENST00000424262 333 ntBASIC3.32□□□□□ -1.88
SRP9P49458 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.32□□□□□ -1.88
SRP9P49458 MOB1AP1-201ENST00000430903 535 ntBASIC3.32□□□□□ -1.88
SRP9P49458 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.32□□□□□ -1.88
SRP9P49458 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.32□□□□□ -1.88
SRP9P49458 TBCAP1-201ENST00000436520 327 ntBASIC3.32□□□□□ -1.88
SRP9P49458 ELOCP3-201ENST00000439303 348 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.32□□□□□ -1.88
SRP9P49458 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.32□□□□□ -1.88
SRP9P49458 OR52Y1P-201ENST00000452418 828 ntBASIC3.32□□□□□ -1.88
SRP9P49458 NANOGP10-201ENST00000453325 895 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.32□□□□□ -1.88
SRP9P49458 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.32□□□□□ -1.88
SRP9P49458 AC005229.2-201ENST00000456995 399 ntBASIC3.32□□□□□ -1.88
SRP9P49458 RPS4XP15-201ENST00000489210 795 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AC010627.1-201ENST00000503819 1294 ntBASIC3.32□□□□□ -1.88
SRP9P49458 HAUS1P1-201ENST00000505275 832 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.32□□□□□ -1.88
SRP9P49458 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.32□□□□□ -1.88
SRP9P49458 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SRP9P49458 OR5AP1P-201ENST00000529730 940 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.32□□□□□ -1.88
SRP9P49458 AC025260.1-201ENST00000548858 430 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.32□□□□□ -1.88
SRP9P49458 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.32□□□□□ -1.88
SRP9P49458 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.32□□□□□ -1.88
SRP9P49458 ZNF192P1-203ENST00000565888 810 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.32□□□□□ -1.88
SRP9P49458 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.32□□□□□ -1.88
SRP9P49458 AC067959.1-201ENST00000604334 379 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.32□□□□□ -1.88
SRP9P49458 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.32□□□□□ -1.88
SRP9P49458 AL450489.1-201ENST00000612071 468 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.32□□□□□ -1.88
SRP9P49458 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.32□□□□□ -1.88
SRP9P49458 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.32□□□□□ -1.88
SRP9P49458 AF001550.2-201ENST00000636643 217 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SRP9P49458 AC021755.1-201ENST00000559747 1447 ntBASIC3.32□□□□□ -1.88
SRP9P49458 AC024560.2-201ENST00000507981 1497 ntBASIC3.32□□□□□ -1.88
SRP9P49458 RIOK3P1-201ENST00000418778 1528 ntBASIC3.32□□□□□ -1.88
SRP9P49458 CEP170P1-201ENST00000502249 4587 ntBASIC3.32□□□□□ -1.88
SRP9P49458 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SRP9P49458 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SRP9P49458 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SRP9P49458 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SRP9P49458 SPATA2P1-201ENST00000431223 2055 ntBASIC3.31□□□□□ -1.88
SRP9P49458 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SRP9P49458 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRP9P49458 DCAF13P1-201ENST00000495256 1330 ntBASIC3.31□□□□□ -1.88
SRP9P49458 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRP9P49458 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRP9P49458 SNORA57.1-201ENST00000391227 145 ntBASIC3.31□□□□□ -1.88
SRP9P49458 RN7SKP285-201ENST00000410137 318 ntBASIC3.31□□□□□ -1.88
SRP9P49458 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRP9P49458 RPL23AP4-201ENST00000427757 463 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.31□□□□□ -1.88
SRP9P49458 MORF4L1P4-201ENST00000450245 976 ntBASIC3.31□□□□□ -1.88
SRP9P49458 MRPS31P2-201ENST00000451581 518 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.31□□□□□ -1.88
SRP9P49458 CYCSP53-201ENST00000455540 265 ntBASIC3.31□□□□□ -1.88
SRP9P49458 OR9M1P-201ENST00000459641 921 ntBASIC3.31□□□□□ -1.88
SRP9P49458 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.31□□□□□ -1.88
SRP9P49458 VN1R105P-201ENST00000486595 910 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AL139099.1-201ENST00000497398 403 ntBASIC3.31□□□□□ -1.88
SRP9P49458 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
SRP9P49458 RN7SKP209-201ENST00000516888 304 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AC087369.1-201ENST00000520775 996 ntBASIC3.31□□□□□ -1.88
SRP9P49458 NDUFB9P3-201ENST00000521269 501 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AC022790.1-201ENST00000522872 204 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.31□□□□□ -1.88
SRP9P49458 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.31□□□□□ -1.88
SRP9P49458 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.31□□□□□ -1.88
SRP9P49458 CYCSP30-201ENST00000546447 172 ntBASIC3.31□□□□□ -1.88
SRP9P49458 YPEL5P3-201ENST00000547227 352 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.31□□□□□ -1.88
SRP9P49458 MIR4425-201ENST00000580572 84 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRP9P49458 AC022916.3-201ENST00000592961 742 ntBASIC3.31□□□□□ -1.88
SRP9P49458 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP9P49458 AC015726.1-201ENST00000602353 681 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AL365503.1-201ENST00000605247 905 ntBASIC3.31□□□□□ -1.88
SRP9P49458 RMST_8.1-201ENST00000610287 165 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AC024941.1-201ENST00000612250 334 ntBASIC3.31□□□□□ -1.88
SRP9P49458 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP9P49458 AC068831.8-201ENST00000620171 435 ntBASIC3.31□□□□□ -1.88
SRP9P49458 MIR7153-201ENST00000637758 57 ntBASIC3.31□□□□□ -1.88
SRP9P49458 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.31□□□□□ -1.88
SRP9P49458 OTUD4P1-201ENST00000237841 3067 ntBASIC3.31□□□□□ -1.88
SRP9P49458 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SRP9P49458 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SRP9P49458 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SRP9P49458 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
SRP9P49458 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms