Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MTND6P6-201ENST00000478031 263 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXA13P31271 FTH1P21-201ENST00000512179 511 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 SNORA19.3-201ENST00000516165 130 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXA13P31271 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA13P31271 AC021451.1-201ENST00000523498 1129 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AC063950.1-201ENST00000552036 308 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXA13P31271 AC110743.1-201ENST00000584870 478 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 AC022916.3-201ENST00000592961 742 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 NTAN1P1-201ENST00000603150 646 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 BNIP3P4-201ENST00000604946 565 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AC064801.1-201ENST00000612025 407 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 MIR6875-201ENST00000617506 72 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AL161637.1-201ENST00000622380 412 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AC015908.5-201ENST00000623289 343 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 CDRT1-208ENST00000630868 794 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA13P31271 AC092162.3-201ENST00000624511 1624 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA13P31271 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXA13P31271 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXA13P31271 AL645568.2-201ENST00000432815 1337 ntBASIC4.7□□□□□ -1.66
HOXA13P31271 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HOXA13P31271 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA13P31271 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HOXA13P31271 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
HOXA13P31271 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA13P31271 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA13P31271 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HOXA13P31271 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA13P31271 RNA5SP372-201ENST00000390836 115 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA13P31271 HDGFP1-201ENST00000405943 252 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA13P31271 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXA13P31271 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXA13P31271 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA13P31271 SFR1P2-201ENST00000421841 730 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA13P31271 AC012519.1-201ENST00000424588 610 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA13P31271 RPL23AP89-201ENST00000439324 255 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AC122718.1-201ENST00000439448 744 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AC009263.1-201ENST00000441193 1239 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 ARL4AP3-201ENST00000441452 574 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AL929288.2-201ENST00000446368 407 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AC005008.1-201ENST00000456151 612 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 RPL38P1-201ENST00000460914 211 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 FAM133DP-201ENST00000464802 691 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HOXA13P31271 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXA13P31271 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXA13P31271 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA13P31271 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXA13P31271 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 RPL23AP87-202ENST00000573039 466 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AC096947.1-201ENST00000603233 470 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AC073387.2-201ENST00000604797 784 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AC027449.1-201ENST00000608890 407 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA13P31271 VN1R74P-201ENST00000613259 503 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AC090246.1-201ENST00000616499 426 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 AC008147.4-201ENST00000617570 1204 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA13P31271 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HOXA13P31271 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXA13P31271 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA13P31271 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXA13P31271 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXA13P31271 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HOXA13P31271 AC119744.1-201ENST00000454746 1715 ntBASIC4.69□□□□□ -1.66
HOXA13P31271 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
HOXA13P31271 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HOXA13P31271 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXA13P31271 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA13P31271 RNA5SP513-201ENST00000364648 118 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 MCTS2P-201ENST00000394552 546 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AC025750.1-201ENST00000399891 379 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 OR6C64P-201ENST00000419708 825 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 OR5BE1P-201ENST00000425977 939 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AL358472.1-201ENST00000431295 329 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA13P31271 AL353597.2-202ENST00000434901 373 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 TBCAP1-201ENST00000436520 327 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXA13P31271 MTND6P18-201ENST00000439477 513 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AC092809.1-201ENST00000441469 474 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA13P31271 snoU109.3-201ENST00000459477 145 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA13P31271 SCARNA1-201ENST00000517138 166 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXA13P31271 AC008562.1-201ENST00000521763 330 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms