Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.28□□□□□ -1.72
CDH3P22223 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH3P22223 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH3P22223 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH3P22223 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH3P22223 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDH3P22223 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH3P22223 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH3P22223 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.28□□□□□ -1.73
CDH3P22223 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH3P22223 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH3P22223 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH3P22223 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH3P22223 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH3P22223 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH3P22223 RNU1-63P-201ENST00000383902 164 ntBASIC4.27□□□□□ -1.73
CDH3P22223 RNU6-317P-201ENST00000384031 107 ntBASIC4.27□□□□□ -1.73
CDH3P22223 ZNF603P-201ENST00000405613 487 ntBASIC4.27□□□□□ -1.73
CDH3P22223 RPS20P14-201ENST00000412545 360 ntBASIC4.27□□□□□ -1.73
CDH3P22223 AC011933.1-201ENST00000413334 321 ntBASIC4.27□□□□□ -1.73
CDH3P22223 RPL21P91-201ENST00000429231 479 ntBASIC4.27□□□□□ -1.73
CDH3P22223 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH3P22223 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH3P22223 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH3P22223 RPL7P28-201ENST00000437739 740 ntBASIC4.27□□□□□ -1.73
CDH3P22223 AC116533.1-201ENST00000459748 321 ntBASIC4.27□□□□□ -1.73
CDH3P22223 RN7SL98P-201ENST00000462271 300 ntBASIC4.27□□□□□ -1.73
CDH3P22223 RN7SL303P-201ENST00000469773 251 ntBASIC4.27□□□□□ -1.73
CDH3P22223 RPS26P15-201ENST00000488067 348 ntBASIC4.27□□□□□ -1.73
CDH3P22223 UBE2V1P12-201ENST00000503954 474 ntBASIC4.27□□□□□ -1.73
CDH3P22223 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH3P22223 AC021451.1-201ENST00000523498 1129 ntBASIC4.27□□□□□ -1.73
CDH3P22223 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.27□□□□□ -1.73
CDH3P22223 AP001372.4-201ENST00000524889 472 ntBASIC4.27□□□□□ -1.73
CDH3P22223 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.27□□□□□ -1.73
CDH3P22223 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.27□□□□□ -1.73
CDH3P22223 AC095057.3-201ENST00000567102 1157 ntBASIC4.27□□□□□ -1.73
CDH3P22223 AC023575.1-201ENST00000580510 358 ntBASIC4.27□□□□□ -1.73
CDH3P22223 AP001180.3-201ENST00000582221 145 ntBASIC4.27□□□□□ -1.73
CDH3P22223 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH3P22223 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.27□□□□□ -1.73
CDH3P22223 VN1R87P-201ENST00000596706 487 ntBASIC4.27□□□□□ -1.73
CDH3P22223 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.27□□□□□ -1.73
CDH3P22223 AC083809.1-201ENST00000615051 472 ntBASIC4.27□□□□□ -1.73
CDH3P22223 uc_338.32-201ENST00000615087 172 ntBASIC4.27□□□□□ -1.73
CDH3P22223 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH3P22223 U6.48-201ENST00000618523 106 ntBASIC4.27□□□□□ -1.73
CDH3P22223 MIR6830-201ENST00000636015 70 ntBASIC4.27□□□□□ -1.73
CDH3P22223 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH3P22223 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH3P22223 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH3P22223 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
CDH3P22223 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH3P22223 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH3P22223 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.26□□□□□ -1.73
CDH3P22223 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH3P22223 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH3P22223 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH3P22223 AC008033.1-201ENST00000216407 1162 ntBASIC4.26□□□□□ -1.73
CDH3P22223 FAM3C2-201ENST00000312214 681 ntBASIC4.26□□□□□ -1.73
CDH3P22223 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH3P22223 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH3P22223 MIR1303-201ENST00000408625 86 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AC114814.2-201ENST00000419195 485 ntBASIC4.26□□□□□ -1.73
CDH3P22223 SFR1P2-201ENST00000421841 730 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH3P22223 AC246680.2-201ENST00000422106 389 ntBASIC4.26□□□□□ -1.73
CDH3P22223 MTCO2P23-201ENST00000425216 680 ntBASIC4.26□□□□□ -1.73
CDH3P22223 CDY14P-201ENST00000431260 1014 ntBASIC4.26□□□□□ -1.73
CDH3P22223 RPS24P8-201ENST00000431490 402 ntBASIC4.26□□□□□ -1.73
CDH3P22223 ELOCP18-201ENST00000434209 337 ntBASIC4.26□□□□□ -1.73
CDH3P22223 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH3P22223 HLA-N-201ENST00000437516 135 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AC092170.1-201ENST00000440211 356 ntBASIC4.26□□□□□ -1.73
CDH3P22223 CDY12P-201ENST00000440679 1015 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH3P22223 CDY13P-201ENST00000445813 1015 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AL606517.1-201ENST00000446914 387 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AL050341.1-201ENST00000447743 313 ntBASIC4.26□□□□□ -1.73
CDH3P22223 CDY23P-201ENST00000451661 1014 ntBASIC4.26□□□□□ -1.73
CDH3P22223 VN1R32P-201ENST00000452234 905 ntBASIC4.26□□□□□ -1.73
CDH3P22223 DHFRP3-201ENST00000455595 559 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AC093267.1-201ENST00000489176 961 ntBASIC4.26□□□□□ -1.73
CDH3P22223 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH3P22223 AC092045.1-201ENST00000495716 1231 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH3P22223 TRAV31-201ENST00000502780 342 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AC096571.1-202ENST00000506634 735 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AC020593.1-201ENST00000507399 299 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AL592156.1-201ENST00000508758 304 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH3P22223 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH3P22223 RFPL1S-203ENST00000539579 330 ntBASIC4.26□□□□□ -1.73
CDH3P22223 AC107016.1-201ENST00000550463 337 ntBASIC4.26□□□□□ -1.73
CDH3P22223 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH3P22223 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH3P22223 RN7SL339P-201ENST00000580597 296 ntBASIC4.26□□□□□ -1.73
CDH3P22223 KPNA2P3-201ENST00000584190 848 ntBASIC4.26□□□□□ -1.73
CDH3P22223 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH3P22223 RPL7P50-201ENST00000600588 727 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms