Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATF4P18848 AC005070.2-201ENST00000604391 260 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AL049634.3-201ENST00000604968 457 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.35□□□□□ -1.55
ATF4P18848 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.35□□□□□ -1.55
ATF4P18848 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AC027559.1-201ENST00000636288 271 ntBASIC5.35□□□□□ -1.55
ATF4P18848 MIR3662-201ENST00000637030 95 ntBASIC5.35□□□□□ -1.55
ATF4P18848 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.35□□□□□ -1.55
ATF4P18848 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.35□□□□□ -1.55
ATF4P18848 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ATF4P18848 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATF4P18848 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATF4P18848 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
ATF4P18848 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 AC104118.1-201ENST00000607625 1589 ntBASIC5.34□□□□□ -1.55
ATF4P18848 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.34□□□□□ -1.55
ATF4P18848 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.34□□□□□ -1.55
ATF4P18848 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ATF4P18848 RNU6-223P-201ENST00000362830 107 ntBASIC5.34□□□□□ -1.55
ATF4P18848 RNA5SP188-201ENST00000362916 129 ntBASIC5.34□□□□□ -1.55
ATF4P18848 RNA5SP65-201ENST00000363166 119 ntBASIC5.34□□□□□ -1.55
ATF4P18848 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 AL121835.1-201ENST00000404250 354 ntBASIC5.34□□□□□ -1.55
ATF4P18848 RNU2-9P-201ENST00000410194 145 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.34□□□□□ -1.55
ATF4P18848 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.34□□□□□ -1.55
ATF4P18848 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 OR2AH1P-201ENST00000425717 928 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.34□□□□□ -1.55
ATF4P18848 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.34□□□□□ -1.55
ATF4P18848 AC092162.1-201ENST00000432828 434 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.34□□□□□ -1.55
ATF4P18848 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 AC083855.1-201ENST00000440041 258 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AC009237.4-201ENST00000441078 238 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AL121871.1-201ENST00000443413 436 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 AC104651.2-201ENST00000447549 528 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 FDX1P2-201ENST00000450769 375 ntBASIC5.34□□□□□ -1.55
ATF4P18848 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 snoU13.3-201ENST00000459441 104 ntBASIC5.34□□□□□ -1.55
ATF4P18848 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.34□□□□□ -1.55
ATF4P18848 AC025271.1-201ENST00000485045 429 ntBASIC5.34□□□□□ -1.55
ATF4P18848 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 AC117522.1-201ENST00000509821 380 ntBASIC5.34□□□□□ -1.55
ATF4P18848 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.34□□□□□ -1.55
ATF4P18848 AC025465.4-201ENST00000513422 638 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AC114797.1-201ENST00000514003 728 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.34□□□□□ -1.55
ATF4P18848 IGLV3-6-201ENST00000523937 250 ntBASIC5.34□□□□□ -1.55
ATF4P18848 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.34□□□□□ -1.55
ATF4P18848 PDCD5P1-201ENST00000543528 309 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.34□□□□□ -1.55
ATF4P18848 AC034105.3-201ENST00000565294 442 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.34□□□□□ -1.55
ATF4P18848 AP001554.1-201ENST00000604533 376 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AL136139.1-201ENST00000605568 222 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AC012510.1-201ENST00000607946 759 ntBASIC5.34□□□□□ -1.55
ATF4P18848 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.34□□□□□ -1.55
ATF4P18848 AC006453.3-201ENST00000635891 377 ntBASIC5.34□□□□□ -1.55
ATF4P18848 AC011471.4-201ENST00000638271 216 ntBASIC5.34□□□□□ -1.55
ATF4P18848 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 AC244517.1-201ENST00000606030 2086 ntBASIC5.34□□□□□ -1.55
ATF4P18848 CKAP2P1-201ENST00000555477 2049 ntBASIC5.34□□□□□ -1.55
ATF4P18848 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATF4P18848 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
ATF4P18848 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ATF4P18848 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
ATF4P18848 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
ATF4P18848 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ATF4P18848 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ATF4P18848 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
ATF4P18848 BRAFP1-201ENST00000445336 2703 ntBASIC5.33□□□□□ -1.56
ATF4P18848 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 ZNF680P1-201ENST00000436625 1469 ntBASIC5.33□□□□□ -1.56
ATF4P18848 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
ATF4P18848 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
ATF4P18848 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms