Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RPL7AP6-201ENST00000477943 801 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 AC091544.1-201ENST00000484702 348 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 AC004453.1-201ENST00000487895 408 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.49□□□□□ -1.53
PTPN1P18031 AC108475.1-201ENST00000507880 950 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN1P18031 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN1P18031 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN1P18031 OR4A45P-201ENST00000529954 901 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN1P18031 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PTPN1P18031 AL359219.2-201ENST00000555184 348 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN1P18031 AC092325.1-201ENST00000566449 554 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.49□□□□□ -1.53
PTPN1P18031 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.49□□□□□ -1.53
PTPN1P18031 MIR4660-201ENST00000583549 74 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 AC087763.1-201ENST00000603391 286 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 AC091488.1-201ENST00000604239 660 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN1P18031 AC138965.3-201ENST00000623875 498 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 MTND5P26-201ENST00000426018 1752 ntBASIC5.49□□□□□ -1.53
PTPN1P18031 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN1P18031 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN1P18031 HSPA8P18-201ENST00000439846 1928 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PTPN1P18031 AL031985.3-201ENST00000565390 2449 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN1P18031 AP005432.1-201ENST00000580891 3485 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN1P18031 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PTPN1P18031 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN1P18031 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN1P18031 ZNF37BP-203ENST00000452306 1352 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AC016716.1-201ENST00000265882 708 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 SNURFL-201ENST00000309296 343 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN1P18031 RNA5SP305-201ENST00000362665 119 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 SNORA58B-201ENST00000364259 136 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PTPN1P18031 Y_RNA.582-201ENST00000391023 95 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AL645927.1-201ENST00000396783 406 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.48□□□□□ -1.53
PTPN1P18031 BTF3P7-201ENST00000407097 488 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN1P18031 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN1P18031 TMBIM7P-201ENST00000418074 855 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AC009237.2-201ENST00000421358 284 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AL953862.1-201ENST00000423016 168 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 NIPA2P1-201ENST00000426223 976 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AC073335.1-201ENST00000427776 363 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 DPPA2P1-201ENST00000428060 556 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN1P18031 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN1P18031 GAPDHP58-201ENST00000438477 1006 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN1P18031 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN1P18031 CEACAMP7-201ENST00000444105 496 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN1P18031 EEF1E1P1-201ENST00000446998 430 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 VN1R10P-201ENST00000447106 875 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN1P18031 RPL7P31-201ENST00000450192 724 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN1P18031 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN1P18031 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.48□□□□□ -1.53
PTPN1P18031 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN1P18031 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PTPN1P18031 PGBD4P4-201ENST00000509673 613 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.48□□□□□ -1.53
PTPN1P18031 DEFB108A-201ENST00000530110 222 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AC092490.3-201ENST00000545370 572 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN1P18031 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN1P18031 AC091489.2-201ENST00000566263 604 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 MIR548S-201ENST00000581352 82 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 VN1R84P-201ENST00000593697 235 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN1P18031 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN1P18031 AC006363.1-201ENST00000603806 463 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AP002799.1-201ENST00000623552 423 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 OR5H6-203ENST00000642105 978 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN1P18031 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN1P18031 LINC00561-201ENST00000565815 2738 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 HSPA8P14-201ENST00000552265 1805 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN1P18031 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN1P18031 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PTPN1P18031 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN1P18031 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PTPN1P18031 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 THAP12P4-201ENST00000528321 2266 ntBASIC5.48□□□□□ -1.53
PTPN1P18031 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PTPN1P18031 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN1P18031 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms