Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.71□□□□□ -1.82
NCK1P16333 AC083923.1-201ENST00000523708 376 ntBASIC3.71□□□□□ -1.82
NCK1P16333 C1DP5-201ENST00000525775 383 ntBASIC3.71□□□□□ -1.82
NCK1P16333 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NCK1P16333 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.71□□□□□ -1.82
NCK1P16333 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.71□□□□□ -1.82
NCK1P16333 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.71□□□□□ -1.82
NCK1P16333 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.71□□□□□ -1.82
NCK1P16333 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.71□□□□□ -1.82
NCK1P16333 AL133457.1-201ENST00000564251 987 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.71□□□□□ -1.82
NCK1P16333 MIR4700-201ENST00000578311 74 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.71□□□□□ -1.82
NCK1P16333 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.71□□□□□ -1.82
NCK1P16333 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.71□□□□□ -1.82
NCK1P16333 AF230666.2-201ENST00000602328 725 ntBASIC3.71□□□□□ -1.82
NCK1P16333 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.71□□□□□ -1.82
NCK1P16333 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.71□□□□□ -1.82
NCK1P16333 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.71□□□□□ -1.82
NCK1P16333 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.71□□□□□ -1.82
NCK1P16333 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NCK1P16333 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.71□□□□□ -1.82
NCK1P16333 OR5BE1P-202ENST00000641168 1176 ntBASIC3.71□□□□□ -1.82
NCK1P16333 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCK1P16333 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NCK1P16333 MFSD8-216ENST00000641147 4009 ntBASIC3.71□□□□□ -1.82
NCK1P16333 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCK1P16333 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NCK1P16333 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NCK1P16333 AC090337.1-201ENST00000579651 2074 ntBASIC3.71□□□□□ -1.82
NCK1P16333 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NCK1P16333 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NCK1P16333 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
NCK1P16333 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NCK1P16333 RNA5SP399-201ENST00000364003 117 ntBASIC3.7□□□□□ -1.82
NCK1P16333 RNU6-356P-201ENST00000384140 107 ntBASIC3.7□□□□□ -1.82
NCK1P16333 DNAJC19P6-201ENST00000401853 280 ntBASIC3.7□□□□□ -1.82
NCK1P16333 RPS16P5-201ENST00000406501 404 ntBASIC3.7□□□□□ -1.82
NCK1P16333 HSPE1P12-201ENST00000412576 301 ntBASIC3.7□□□□□ -1.82
NCK1P16333 NUP35P2-201ENST00000416748 943 ntBASIC3.7□□□□□ -1.82
NCK1P16333 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.7□□□□□ -1.82
NCK1P16333 FAR2P4-202ENST00000425399 584 ntBASIC3.7□□□□□ -1.82
NCK1P16333 RPL37P1-201ENST00000432310 284 ntBASIC3.7□□□□□ -1.82
NCK1P16333 MTCO3P43-201ENST00000440974 771 ntBASIC3.7□□□□□ -1.82
NCK1P16333 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.7□□□□□ -1.82
NCK1P16333 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.7□□□□□ -1.82
NCK1P16333 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NCK1P16333 AP000926.1-201ENST00000479573 241 ntBASIC3.7□□□□□ -1.82
NCK1P16333 AC041039.1-201ENST00000485656 536 ntBASIC3.7□□□□□ -1.82
NCK1P16333 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NCK1P16333 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.7□□□□□ -1.82
NCK1P16333 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.7□□□□□ -1.82
NCK1P16333 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.7□□□□□ -1.82
NCK1P16333 SNORA76.2-201ENST00000517095 137 ntBASIC3.7□□□□□ -1.82
NCK1P16333 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.7□□□□□ -1.82
NCK1P16333 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.7□□□□□ -1.82
NCK1P16333 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.7□□□□□ -1.82
NCK1P16333 AC092851.1-201ENST00000535964 478 ntBASIC3.7□□□□□ -1.82
NCK1P16333 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.7□□□□□ -1.82
NCK1P16333 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.7□□□□□ -1.82
NCK1P16333 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.7□□□□□ -1.82
NCK1P16333 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.7□□□□□ -1.82
NCK1P16333 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.7□□□□□ -1.82
NCK1P16333 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.7□□□□□ -1.82
NCK1P16333 AL390816.3-201ENST00000604527 1066 ntBASIC3.7□□□□□ -1.82
NCK1P16333 AC113194.1-201ENST00000606037 500 ntBASIC3.7□□□□□ -1.82
NCK1P16333 AL450270.1-201ENST00000606160 391 ntBASIC3.7□□□□□ -1.82
NCK1P16333 MIR6798-201ENST00000612887 67 ntBASIC3.7□□□□□ -1.82
NCK1P16333 AC073342.3-201ENST00000624211 193 ntBASIC3.7□□□□□ -1.82
NCK1P16333 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NCK1P16333 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NCK1P16333 AC095050.2-201ENST00000510748 1458 ntBASIC3.7□□□□□ -1.82
NCK1P16333 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.7□□□□□ -1.82
NCK1P16333 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NCK1P16333 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NCK1P16333 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NCK1P16333 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.69□□□□□ -1.82
NCK1P16333 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
NCK1P16333 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.69□□□□□ -1.82
NCK1P16333 ENSAP3-201ENST00000312710 333 ntBASIC3.69□□□□□ -1.82
NCK1P16333 SNORA60-201ENST00000362396 134 ntBASIC3.69□□□□□ -1.82
NCK1P16333 RNA5SP447-201ENST00000363749 119 ntBASIC3.69□□□□□ -1.82
NCK1P16333 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NCK1P16333 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.69□□□□□ -1.82
NCK1P16333 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.69□□□□□ -1.82
NCK1P16333 HLFP1-201ENST00000402375 499 ntBASIC3.69□□□□□ -1.82
NCK1P16333 RNU4-25P-201ENST00000410569 230 ntBASIC3.69□□□□□ -1.82
NCK1P16333 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.69□□□□□ -1.82
NCK1P16333 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.69□□□□□ -1.82
NCK1P16333 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.69□□□□□ -1.82
NCK1P16333 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.69□□□□□ -1.82
NCK1P16333 HIGD1AP4-201ENST00000430194 280 ntBASIC3.69□□□□□ -1.82
NCK1P16333 FTH1P6-201ENST00000430768 320 ntBASIC3.69□□□□□ -1.82
NCK1P16333 AL691517.1-201ENST00000440833 1235 ntBASIC3.69□□□□□ -1.82
NCK1P16333 RPL29P29-201ENST00000448725 423 ntBASIC3.69□□□□□ -1.82
NCK1P16333 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.69□□□□□ -1.82
NCK1P16333 RPS11P1-201ENST00000451072 473 ntBASIC3.69□□□□□ -1.82
NCK1P16333 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.69□□□□□ -1.82
NCK1P16333 AC009963.2-201ENST00000453431 138 ntBASIC3.69□□□□□ -1.82
NCK1P16333 RPL35AP28-201ENST00000459730 331 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms