Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 BNIP3P41-202ENST00000616656 861 ntBASIC5.77□□□□□ -1.49
CFTRP13569 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CFTRP13569 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.77□□□□□ -1.49
CFTRP13569 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CFTRP13569 ZNF90P1-201ENST00000480493 1951 ntBASIC5.77□□□□□ -1.49
CFTRP13569 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CFTRP13569 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CFTRP13569 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CFTRP13569 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CFTRP13569 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CFTRP13569 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CFTRP13569 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.77□□□□□ -1.49
CFTRP13569 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.77□□□□□ -1.49
CFTRP13569 OR6K4P-201ENST00000423179 955 ntBASIC5.77□□□□□ -1.49
CFTRP13569 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.77□□□□□ -1.49
CFTRP13569 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.77□□□□□ -1.49
CFTRP13569 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
CFTRP13569 RNA5SP356-201ENST00000515972 94 ntBASIC5.77□□□□□ -1.49
CFTRP13569 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.77□□□□□ -1.49
CFTRP13569 IGHV3-63-201ENST00000518422 341 ntBASIC5.77□□□□□ -1.49
CFTRP13569 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.77□□□□□ -1.49
CFTRP13569 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.77□□□□□ -1.49
CFTRP13569 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.76□□□□□ -1.49
CFTRP13569 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.76□□□□□ -1.49
CFTRP13569 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CFTRP13569 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.76□□□□□ -1.49
CFTRP13569 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CFTRP13569 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CFTRP13569 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CFTRP13569 RNU1-70P-201ENST00000362618 164 ntBASIC5.76□□□□□ -1.49
CFTRP13569 MTND4P22-201ENST00000413116 1169 ntBASIC5.76□□□□□ -1.49
CFTRP13569 AL139132.1-201ENST00000431587 344 ntBASIC5.76□□□□□ -1.49
CFTRP13569 AC005002.1-201ENST00000447458 540 ntBASIC5.76□□□□□ -1.49
CFTRP13569 AC239809.1-201ENST00000450470 217 ntBASIC5.76□□□□□ -1.49
CFTRP13569 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.76□□□□□ -1.49
CFTRP13569 HMGB3P14-201ENST00000494195 599 ntBASIC5.76□□□□□ -1.49
CFTRP13569 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.76□□□□□ -1.49
CFTRP13569 AC008885.1-201ENST00000514930 301 ntBASIC5.76□□□□□ -1.49
CFTRP13569 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.76□□□□□ -1.49
CFTRP13569 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.76□□□□□ -1.49
CFTRP13569 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.76□□□□□ -1.49
CFTRP13569 AC013412.1-201ENST00000610687 192 ntBASIC5.76□□□□□ -1.49
CFTRP13569 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.76□□□□□ -1.49
CFTRP13569 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.76□□□□□ -1.49
CFTRP13569 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CFTRP13569 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CFTRP13569 SRP72P2-201ENST00000344851 1979 ntBASIC5.75□□□□□ -1.49
CFTRP13569 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
CFTRP13569 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CFTRP13569 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CFTRP13569 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
CFTRP13569 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.75□□□□□ -1.49
CFTRP13569 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.75□□□□□ -1.49
CFTRP13569 KC877373.1-201ENST00000479066 408 ntBASIC5.75□□□□□ -1.49
CFTRP13569 NPM1P17-201ENST00000479221 602 ntBASIC5.75□□□□□ -1.49
CFTRP13569 ARL4AP1-201ENST00000503220 705 ntBASIC5.75□□□□□ -1.49
CFTRP13569 HIGD1AP1-201ENST00000550979 275 ntBASIC5.75□□□□□ -1.49
CFTRP13569 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.75□□□□□ -1.49
CFTRP13569 AC007390.2-201ENST00000606229 3803 ntBASIC5.75□□□□□ -1.49
CFTRP13569 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CFTRP13569 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CFTRP13569 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CFTRP13569 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CFTRP13569 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.75□□□□□ -1.49
CFTRP13569 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CFTRP13569 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
CFTRP13569 MTCO1P24-201ENST00000515438 1558 ntBASIC5.75□□□□□ -1.49
CFTRP13569 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.74□□□□□ -1.49
CFTRP13569 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CFTRP13569 SNORA48.8-201ENST00000391324 134 ntBASIC5.74□□□□□ -1.49
CFTRP13569 AC007899.1-201ENST00000412776 775 ntBASIC5.74□□□□□ -1.49
CFTRP13569 Z99755.1-201ENST00000414048 380 ntBASIC5.74□□□□□ -1.49
CFTRP13569 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.74□□□□□ -1.49
CFTRP13569 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.74□□□□□ -1.49
CFTRP13569 AC026333.2-201ENST00000542164 106 ntBASIC5.74□□□□□ -1.49
CFTRP13569 AC135001.1-201ENST00000544546 283 ntBASIC5.74□□□□□ -1.49
CFTRP13569 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.74□□□□□ -1.49
CFTRP13569 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.74□□□□□ -1.49
CFTRP13569 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CFTRP13569 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CFTRP13569 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CFTRP13569 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.74□□□□□ -1.49
CFTRP13569 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CFTRP13569 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CFTRP13569 SNORA5B-201ENST00000363786 132 ntBASIC5.73□□□□□ -1.49
CFTRP13569 RNU6-7-201ENST00000364784 107 ntBASIC5.73□□□□□ -1.49
CFTRP13569 RNU6-8-201ENST00000365467 107 ntBASIC5.73□□□□□ -1.49
CFTRP13569 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.73□□□□□ -1.49
CFTRP13569 RN7SKP199-201ENST00000410325 305 ntBASIC5.73□□□□□ -1.49
CFTRP13569 TCP1P3-201ENST00000414406 1498 ntBASIC5.73□□□□□ -1.49
CFTRP13569 AL356535.1-201ENST00000440335 398 ntBASIC5.73□□□□□ -1.49
CFTRP13569 AC005798.1-201ENST00000513715 387 ntBASIC5.73□□□□□ -1.49
CFTRP13569 DUXAP6-201ENST00000553858 601 ntBASIC5.73□□□□□ -1.49
CFTRP13569 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.73□□□□□ -1.49
CFTRP13569 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.73□□□□□ -1.49
CFTRP13569 OR7M1P-201ENST00000608946 533 ntBASIC5.73□□□□□ -1.49
CFTRP13569 AC006946.3-201ENST00000609791 756 ntBASIC5.73□□□□□ -1.49
CFTRP13569 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CFTRP13569 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CFTRP13569 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms