Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TOP1P11387 AL161912.2-201ENST00000565707 3007 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC025125.1-201ENST00000624743 1922 ntBASIC4.47□□□□□ -1.69
TOP1P11387 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TOP1P11387 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TOP1P11387 U8.11-201ENST00000384699 133 ntBASIC4.47□□□□□ -1.69
TOP1P11387 U8.12-201ENST00000384701 133 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.47□□□□□ -1.69
TOP1P11387 MTND2P15-201ENST00000418575 892 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.47□□□□□ -1.69
TOP1P11387 OR4F13P-201ENST00000428478 931 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.47□□□□□ -1.69
TOP1P11387 AL035246.1-201ENST00000433554 1255 ntBASIC4.47□□□□□ -1.69
TOP1P11387 RPL7P28-201ENST00000437739 740 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC023512.1-201ENST00000444513 499 ntBASIC4.47□□□□□ -1.69
TOP1P11387 Z95327.1-201ENST00000446082 482 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.47□□□□□ -1.69
TOP1P11387 TPMTP4-201ENST00000450749 678 ntBASIC4.47□□□□□ -1.69
TOP1P11387 SNORA84-201ENST00000459229 133 ntBASIC4.47□□□□□ -1.69
TOP1P11387 U8.18-201ENST00000459285 133 ntBASIC4.47□□□□□ -1.69
TOP1P11387 RPL7P48-201ENST00000461513 746 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC018635.1-201ENST00000468292 1030 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC026726.1-201ENST00000512859 601 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.47□□□□□ -1.69
TOP1P11387 NARSP2-201ENST00000518524 679 ntBASIC4.47□□□□□ -1.69
TOP1P11387 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.47□□□□□ -1.69
TOP1P11387 AC022695.1-201ENST00000522089 237 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.47□□□□□ -1.69
TOP1P11387 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.47□□□□□ -1.69
TOP1P11387 AC106785.3-201ENST00000564064 847 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.47□□□□□ -1.69
TOP1P11387 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.47□□□□□ -1.69
TOP1P11387 AC112230.1-201ENST00000604342 547 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AL139286.1-201ENST00000604465 483 ntBASIC4.47□□□□□ -1.69
TOP1P11387 MIR7973-1-201ENST00000614683 76 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC004825.2-201ENST00000616634 455 ntBASIC4.47□□□□□ -1.69
TOP1P11387 AC039056.2-201ENST00000622261 511 ntBASIC4.47□□□□□ -1.69
TOP1P11387 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TOP1P11387 AL122126.1-201ENST00000546905 1318 ntBASIC4.46□□□□□ -1.69
TOP1P11387 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
TOP1P11387 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.46□□□□□ -1.69
TOP1P11387 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TOP1P11387 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
TOP1P11387 SNORA62.2-201ENST00000364672 152 ntBASIC4.46□□□□□ -1.7
TOP1P11387 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TOP1P11387 RNU6-244P-201ENST00000391028 104 ntBASIC4.46□□□□□ -1.7
TOP1P11387 RN7SKP177-201ENST00000410567 355 ntBASIC4.46□□□□□ -1.7
TOP1P11387 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.46□□□□□ -1.7
TOP1P11387 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.46□□□□□ -1.7
TOP1P11387 CBX1P4-201ENST00000439415 457 ntBASIC4.46□□□□□ -1.7
TOP1P11387 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.46□□□□□ -1.7
TOP1P11387 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.46□□□□□ -1.7
TOP1P11387 AL133162.1-201ENST00000463228 453 ntBASIC4.46□□□□□ -1.7
TOP1P11387 RNU6-1004P-201ENST00000516584 111 ntBASIC4.46□□□□□ -1.7
TOP1P11387 MIR2114-201ENST00000516645 80 ntBASIC4.46□□□□□ -1.7
TOP1P11387 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.46□□□□□ -1.7
TOP1P11387 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.46□□□□□ -1.7
TOP1P11387 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.46□□□□□ -1.7
TOP1P11387 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.46□□□□□ -1.7
TOP1P11387 AC135803.1-201ENST00000608748 565 ntBASIC4.46□□□□□ -1.7
TOP1P11387 AL121772.2-201ENST00000614331 297 ntBASIC4.46□□□□□ -1.7
TOP1P11387 CR392039.4-201ENST00000624968 501 ntBASIC4.46□□□□□ -1.7
TOP1P11387 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.46□□□□□ -1.7
TOP1P11387 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.46□□□□□ -1.7
TOP1P11387 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.46□□□□□ -1.7
TOP1P11387 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TOP1P11387 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.46□□□□□ -1.7
TOP1P11387 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TOP1P11387 NCAPGP1-201ENST00000505112 1814 ntBASIC4.46□□□□□ -1.7
TOP1P11387 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TOP1P11387 MTCO1P14-201ENST00000441695 1559 ntBASIC4.45□□□□□ -1.7
TOP1P11387 XIAPP3-201ENST00000312918 795 ntBASIC4.45□□□□□ -1.7
TOP1P11387 RPS12P23-201ENST00000419579 400 ntBASIC4.45□□□□□ -1.7
TOP1P11387 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.45□□□□□ -1.7
TOP1P11387 AL139247.1-201ENST00000422768 325 ntBASIC4.45□□□□□ -1.7
TOP1P11387 AL390879.2-203ENST00000426943 1121 ntBASIC4.45□□□□□ -1.7
TOP1P11387 NPM1P34-201ENST00000428821 893 ntBASIC4.45□□□□□ -1.7
TOP1P11387 AC018644.1-201ENST00000429934 551 ntBASIC4.45□□□□□ -1.7
TOP1P11387 AL031663.1-201ENST00000437445 219 ntBASIC4.45□□□□□ -1.7
TOP1P11387 AL627224.1-201ENST00000448334 444 ntBASIC4.45□□□□□ -1.7
TOP1P11387 HMGB3P14-201ENST00000494195 599 ntBASIC4.45□□□□□ -1.7
TOP1P11387 HMGB1P21-201ENST00000502313 581 ntBASIC4.45□□□□□ -1.7
TOP1P11387 AC108941.1-201ENST00000502853 530 ntBASIC4.45□□□□□ -1.7
TOP1P11387 BTF3L4P4-201ENST00000506381 449 ntBASIC4.45□□□□□ -1.7
TOP1P11387 AC008802.1-201ENST00000519121 791 ntBASIC4.45□□□□□ -1.7
TOP1P11387 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TOP1P11387 OR4V1P-201ENST00000525394 1140 ntBASIC4.45□□□□□ -1.7
TOP1P11387 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TOP1P11387 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.45□□□□□ -1.7
TOP1P11387 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.45□□□□□ -1.7
TOP1P11387 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.45□□□□□ -1.7
TOP1P11387 AC090877.1-201ENST00000561418 344 ntBASIC4.45□□□□□ -1.7
TOP1P11387 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.45□□□□□ -1.7
TOP1P11387 AC245389.1-201ENST00000605141 529 ntBASIC4.45□□□□□ -1.7
TOP1P11387 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.45□□□□□ -1.7
TOP1P11387 ATE1-AS1-202ENST00000636460 506 ntBASIC4.45□□□□□ -1.7
TOP1P11387 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
TOP1P11387 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TOP1P11387 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.45□□□□□ -1.7
TOP1P11387 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms