Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.83□□□□□ -1.8
SFTPBP07988 CNOT7P1-201ENST00000429006 852 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 AL353748.1-201ENST00000440753 474 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.83□□□□□ -1.8
SFTPBP07988 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.83□□□□□ -1.8
SFTPBP07988 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.83□□□□□ -1.8
SFTPBP07988 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.83□□□□□ -1.8
SFTPBP07988 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.83□□□□□ -1.8
SFTPBP07988 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.83□□□□□ -1.8
SFTPBP07988 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 RPL21P103-201ENST00000479921 488 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SFTPBP07988 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.83□□□□□ -1.8
SFTPBP07988 AC011352.3-201ENST00000505162 593 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.83□□□□□ -1.8
SFTPBP07988 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.83□□□□□ -1.8
SFTPBP07988 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.83□□□□□ -1.8
SFTPBP07988 AP003102.1-201ENST00000525638 661 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.83□□□□□ -1.8
SFTPBP07988 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.83□□□□□ -1.8
SFTPBP07988 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.83□□□□□ -1.8
SFTPBP07988 PARP1P2-201ENST00000556806 195 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.83□□□□□ -1.8
SFTPBP07988 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.83□□□□□ -1.8
SFTPBP07988 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.83□□□□□ -1.8
SFTPBP07988 MTCYBP28-201ENST00000566728 1132 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 TMF1P1-201ENST00000576058 373 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 DNAJC19P3-201ENST00000594491 331 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.83□□□□□ -1.8
SFTPBP07988 BPIFA4P-203ENST00000603168 689 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 AL390816.3-201ENST00000604527 1066 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SFTPBP07988 VN1R74P-201ENST00000613259 503 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 AC006338.2-201ENST00000616864 791 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 AL138955.1-201ENST00000622881 1040 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 AC006065.5-201ENST00000623427 349 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.83□□□□□ -1.8
SFTPBP07988 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.83□□□□□ -1.8
SFTPBP07988 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SFTPBP07988 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SFTPBP07988 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SFTPBP07988 DCAF13P1-201ENST00000495256 1330 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SFTPBP07988 SGO1P1-201ENST00000603525 1447 ntBASIC3.83□□□□□ -1.8
SFTPBP07988 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SFTPBP07988 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SFTPBP07988 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SFTPBP07988 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SFTPBP07988 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.82□□□□□ -1.8
SFTPBP07988 CPHL1P-201ENST00000461341 3407 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SFTPBP07988 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.82□□□□□ -1.8
SFTPBP07988 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
SFTPBP07988 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SFTPBP07988 LINC00622-201ENST00000562811 1570 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 DHX40P1-201ENST00000588725 1412 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.82□□□□□ -1.8
SFTPBP07988 RNA5SP22-201ENST00000365393 109 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 RNU6-444P-201ENST00000383988 108 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 RNU6-549P-201ENST00000384433 107 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SFTPBP07988 VN1R8P-201ENST00000407739 893 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SFTPBP07988 RNA5SP104-201ENST00000410989 118 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.82□□□□□ -1.8
SFTPBP07988 AC008280.1-201ENST00000418851 412 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 AC062016.2-201ENST00000420950 676 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.82□□□□□ -1.8
SFTPBP07988 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.82□□□□□ -1.8
SFTPBP07988 RPP40P1-201ENST00000426762 456 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 AC073335.1-201ENST00000427776 363 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 PSMA2P3-201ENST00000429685 675 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.82□□□□□ -1.8
SFTPBP07988 RPL23AP93-201ENST00000440847 484 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 AL592437.1-201ENST00000443781 492 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 AL451050.1-201ENST00000450126 415 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.82□□□□□ -1.8
SFTPBP07988 RPS23P7-201ENST00000466210 444 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 GAPDHP36-201ENST00000480688 918 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 AC083829.1-201ENST00000503756 657 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 AK3P4-201ENST00000504283 583 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SFTPBP07988 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.82□□□□□ -1.8
SFTPBP07988 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.82□□□□□ -1.8
SFTPBP07988 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.82□□□□□ -1.8
SFTPBP07988 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SFTPBP07988 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.82□□□□□ -1.8
SFTPBP07988 AC109471.1-201ENST00000511631 612 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SFTPBP07988 AC119751.1-201ENST00000513357 765 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 IGLVIV-53-201ENST00000520107 367 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.82□□□□□ -1.8
SFTPBP07988 AP001781.1-201ENST00000530977 207 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.82□□□□□ -1.8
SFTPBP07988 AC009643.1-201ENST00000532030 391 ntBASIC3.82□□□□□ -1.8
SFTPBP07988 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms