Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 ARL2BPP6-201ENST00000512757 439 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 RN7SKP60-201ENST00000516985 239 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 RNA5SP179-201ENST00000517284 121 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 IGKV2D-23-201ENST00000518179 286 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC008489.1-201ENST00000524271 483 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC004923.2-201ENST00000529649 369 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AL139174.1-201ENST00000531489 886 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC068446.3-201ENST00000555285 382 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 MIR4697-201ENST00000582977 78 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC091167.4-201ENST00000605079 184 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AL354696.1-201ENST00000614652 497 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 ZYXP1-201ENST00000617638 118 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC139769.3-201ENST00000618383 175 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AL356490.1-201ENST00000623079 479 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AC015726.3-201ENST00000624501 418 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 FAM91A3P-201ENST00000456826 2544 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AP002001.2-201ENST00000529025 1469 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 AL356489.2-201ENST00000566968 3528 ntBASIC3.4□□□□□ -1.87
HLA-DPB1P04440 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 TNPO1P3-201ENST00000436471 2662 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AL451142.2-201ENST00000429076 2090 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 MFSD8-220ENST00000641243 1422 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 SNORA62.2-201ENST00000364672 152 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 SNORD115-48-201ENST00000364764 76 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 SNORD51.1-201ENST00000365405 77 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 MIR184-201ENST00000384962 84 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC004975.1-201ENST00000428733 208 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 ZNF965P-201ENST00000432501 817 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 BMS1P19-201ENST00000433925 393 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 RPL12P46-201ENST00000436610 195 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 MTCO3P43-201ENST00000440974 771 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 BTBD7P2-201ENST00000441962 620 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC025181.1-201ENST00000477507 416 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 PPIAP15-201ENST00000479662 484 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 RPS4XP15-201ENST00000489210 795 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 RPL23AP73-201ENST00000492507 471 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 OR9N1P-202ENST00000494289 481 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 NDUFB4P12-201ENST00000513465 390 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 HMGB3P26-201ENST00000560051 582 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AL109741.3-201ENST00000561748 592 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 CBX3P2-202ENST00000583365 535 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AP003117.1-201ENST00000602771 554 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC243654.2-201ENST00000612843 443 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC116563.2-201ENST00000624751 535 ntBASIC3.39□□□□□ -1.87
HLA-DPB1P04440 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DPB1P04440 AC009229.4-201ENST00000623854 1947 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 RNA5SP283-201ENST00000365604 119 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 MIR199A2-201ENST00000385289 110 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 ARL2BPP3-201ENST00000421226 480 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC006989.1-201ENST00000427212 131 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AL117339.2-201ENST00000430475 180 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AL357520.1-201ENST00000441557 453 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPB1P04440 RPL5P32-201ENST00000454085 879 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC108941.1-201ENST00000502853 530 ntBASIC3.38□□□□□ -1.87
HLA-DPB1P04440 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms