Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HIGD1AP4-201ENST00000430194 280 ntBASIC4.34□□□□□ -1.71
VTNP04004 MTCO1P52-201ENST00000433928 531 ntBASIC4.34□□□□□ -1.71
VTNP04004 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VTNP04004 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.34□□□□□ -1.71
VTNP04004 AL591623.2-201ENST00000449978 222 ntBASIC4.34□□□□□ -1.71
VTNP04004 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.34□□□□□ -1.71
VTNP04004 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.34□□□□□ -1.71
VTNP04004 RN7SL585P-201ENST00000470538 280 ntBASIC4.34□□□□□ -1.71
VTNP04004 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
VTNP04004 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.34□□□□□ -1.71
VTNP04004 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.34□□□□□ -1.71
VTNP04004 AC087894.1-201ENST00000538359 518 ntBASIC4.34□□□□□ -1.71
VTNP04004 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.34□□□□□ -1.71
VTNP04004 NPM1P47-201ENST00000560843 856 ntBASIC4.34□□□□□ -1.71
VTNP04004 AC104229.1-201ENST00000561364 255 ntBASIC4.34□□□□□ -1.71
VTNP04004 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.34□□□□□ -1.71
VTNP04004 AC022968.1-201ENST00000567372 442 ntBASIC4.34□□□□□ -1.71
VTNP04004 CYP4A43P-201ENST00000568156 121 ntBASIC4.34□□□□□ -1.71
VTNP04004 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
VTNP04004 AC090312.1-201ENST00000580637 348 ntBASIC4.34□□□□□ -1.71
VTNP04004 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.34□□□□□ -1.71
VTNP04004 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.34□□□□□ -1.71
VTNP04004 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.34□□□□□ -1.71
VTNP04004 AC104662.1-201ENST00000604448 511 ntBASIC4.34□□□□□ -1.71
VTNP04004 AC007342.8-201ENST00000623278 678 ntBASIC4.34□□□□□ -1.71
VTNP04004 AC012442.3-202ENST00000636742 206 ntBASIC4.34□□□□□ -1.71
VTNP04004 AC008432.1-201ENST00000615912 1320 ntBASIC4.34□□□□□ -1.71
VTNP04004 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VTNP04004 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.34□□□□□ -1.72
VTNP04004 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VTNP04004 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
VTNP04004 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.33□□□□□ -1.72
VTNP04004 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.33□□□□□ -1.72
VTNP04004 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.33□□□□□ -1.72
VTNP04004 RNA5SP97-201ENST00000365006 84 ntBASIC4.33□□□□□ -1.72
VTNP04004 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VTNP04004 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.33□□□□□ -1.72
VTNP04004 RNU4-31P-201ENST00000384211 141 ntBASIC4.33□□□□□ -1.72
VTNP04004 HMGB1P13-201ENST00000406019 642 ntBASIC4.33□□□□□ -1.72
VTNP04004 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.33□□□□□ -1.72
VTNP04004 AC099336.2-201ENST00000422457 254 ntBASIC4.33□□□□□ -1.72
VTNP04004 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.33□□□□□ -1.72
VTNP04004 ELOCP6-201ENST00000429066 328 ntBASIC4.33□□□□□ -1.72
VTNP04004 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.33□□□□□ -1.72
VTNP04004 NOTCH2P1-201ENST00000443481 624 ntBASIC4.33□□□□□ -1.72
VTNP04004 AL133547.1-201ENST00000448546 220 ntBASIC4.33□□□□□ -1.72
VTNP04004 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.33□□□□□ -1.72
VTNP04004 AC099560.2-201ENST00000457554 255 ntBASIC4.33□□□□□ -1.72
VTNP04004 ELOCP12-201ENST00000458706 328 ntBASIC4.33□□□□□ -1.72
VTNP04004 METTL15P1-201ENST00000481421 1045 ntBASIC4.33□□□□□ -1.72
VTNP04004 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.33□□□□□ -1.72
VTNP04004 PPBPP1-201ENST00000510807 373 ntBASIC4.33□□□□□ -1.72
VTNP04004 RNU6-347P-201ENST00000516658 105 ntBASIC4.33□□□□□ -1.72
VTNP04004 RNA5SP143-201ENST00000516936 115 ntBASIC4.33□□□□□ -1.72
VTNP04004 TRMT10BP1-201ENST00000519377 943 ntBASIC4.33□□□□□ -1.72
VTNP04004 AC087369.1-201ENST00000520775 996 ntBASIC4.33□□□□□ -1.72
VTNP04004 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.33□□□□□ -1.72
VTNP04004 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.33□□□□□ -1.72
VTNP04004 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.33□□□□□ -1.72
VTNP04004 CYCSP30-201ENST00000546447 172 ntBASIC4.33□□□□□ -1.72
VTNP04004 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.33□□□□□ -1.72
VTNP04004 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.33□□□□□ -1.72
VTNP04004 HNRNPCP4-201ENST00000571636 900 ntBASIC4.33□□□□□ -1.72
VTNP04004 AC087499.8-201ENST00000578406 226 ntBASIC4.33□□□□□ -1.72
VTNP04004 MIR4444-1-201ENST00000581696 74 ntBASIC4.33□□□□□ -1.72
VTNP04004 MIR4444-2-201ENST00000584390 74 ntBASIC4.33□□□□□ -1.72
VTNP04004 AC012254.4-201ENST00000588843 273 ntBASIC4.33□□□□□ -1.72
VTNP04004 BNIP3P33-201ENST00000598912 569 ntBASIC4.33□□□□□ -1.72
VTNP04004 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.33□□□□□ -1.72
VTNP04004 AC021851.1-201ENST00000608537 1082 ntBASIC4.33□□□□□ -1.72
VTNP04004 AL121652.1-201ENST00000608851 448 ntBASIC4.33□□□□□ -1.72
VTNP04004 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.33□□□□□ -1.72
VTNP04004 AC124312.6-202ENST00000623624 418 ntBASIC4.33□□□□□ -1.72
VTNP04004 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.33□□□□□ -1.72
VTNP04004 LINC01109-201ENST00000603837 3081 ntBASIC4.33□□□□□ -1.72
VTNP04004 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VTNP04004 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VTNP04004 AC022893.2-201ENST00000564832 3296 ntBASIC4.32□□□□□ -1.72
VTNP04004 AP000568.1-201ENST00000282964 442 ntBASIC4.32□□□□□ -1.72
VTNP04004 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VTNP04004 RNU6-304P-201ENST00000364855 107 ntBASIC4.32□□□□□ -1.72
VTNP04004 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VTNP04004 MIR122-201ENST00000385044 85 ntBASIC4.32□□□□□ -1.72
VTNP04004 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VTNP04004 AC093719.1-202ENST00000392735 373 ntBASIC4.32□□□□□ -1.72
VTNP04004 AL355615.1-201ENST00000406187 641 ntBASIC4.32□□□□□ -1.72
VTNP04004 MIR1251-201ENST00000408552 70 ntBASIC4.32□□□□□ -1.72
VTNP04004 RNA5SP146-201ENST00000410743 123 ntBASIC4.32□□□□□ -1.72
VTNP04004 AC105402.1-201ENST00000413336 545 ntBASIC4.32□□□□□ -1.72
VTNP04004 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.32□□□□□ -1.72
VTNP04004 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.32□□□□□ -1.72
VTNP04004 MTCO3P4-201ENST00000419236 787 ntBASIC4.32□□□□□ -1.72
VTNP04004 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VTNP04004 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.32□□□□□ -1.72
VTNP04004 DEFB130D-201ENST00000426866 237 ntBASIC4.32□□□□□ -1.72
VTNP04004 OR4F13P-201ENST00000428478 931 ntBASIC4.32□□□□□ -1.72
VTNP04004 RANP8-201ENST00000444720 713 ntBASIC4.32□□□□□ -1.72
VTNP04004 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.32□□□□□ -1.72
VTNP04004 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VTNP04004 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms