Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU4-75P-201ENST00000364621 146 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VPS4BO75351 Y_RNA.559-201ENST00000384686 107 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 RNU6-253P-201ENST00000384730 105 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VPS4BO75351 CYB5AP4-201ENST00000396692 399 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 ATP5F1P4-201ENST00000397288 746 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AC013442.1-201ENST00000397347 228 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AL121978.1-201ENST00000402778 359 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AL356967.1-201ENST00000406305 431 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 OR4K12P-201ENST00000406538 961 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 RNU6-648P-201ENST00000410190 107 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 RNU6-272P-201ENST00000411028 104 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 RPS15AP38-201ENST00000413110 372 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS4BO75351 CENPIP1-201ENST00000425713 902 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 OR2AH1P-201ENST00000425717 928 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS4BO75351 USP9YP14-201ENST00000430663 563 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4BO75351 ACTR3P2-201ENST00000439585 1257 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 NPM1P39-201ENST00000449818 867 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS4BO75351 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4BO75351 RPL37P3-201ENST00000456825 293 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
VPS4BO75351 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4BO75351 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS4BO75351 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS4BO75351 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS4BO75351 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS4BO75351 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS4BO75351 RAB9BP1-201ENST00000519581 626 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AF279873.1-201ENST00000523393 313 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
VPS4BO75351 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS4BO75351 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4BO75351 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS4BO75351 AC138915.2-201ENST00000569776 97 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 ROCK1P1-201ENST00000573767 549 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AC008507.1-201ENST00000587506 734 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AC095055.1-201ENST00000603472 1113 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AC069304.2-201ENST00000605154 435 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AC104073.3-201ENST00000610942 955 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4BO75351 AP001005.3-201ENST00000622049 129 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4BO75351 AL392088.2-201ENST00000637607 285 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 CDR1-202ENST00000625883 1485 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 MTND5P24-201ENST00000438892 1767 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 AL672167.1-204ENST00000641875 3017 ntBASIC4.98□□□□□ -1.61
VPS4BO75351 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4BO75351 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4BO75351 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VPS4BO75351 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4BO75351 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VPS4BO75351 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4BO75351 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4BO75351 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
VPS4BO75351 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
VPS4BO75351 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4BO75351 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4BO75351 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS4BO75351 SNORA17.1-201ENST00000362945 126 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS4BO75351 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4BO75351 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
VPS4BO75351 AL078599.1-201ENST00000402075 293 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 CYCSP45-201ENST00000402289 315 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 RPL7P8-201ENST00000411964 730 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 FCF1P2-201ENST00000415284 583 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS4BO75351 COX6CP17-201ENST00000421389 185 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AL360081.1-201ENST00000428299 555 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS4BO75351 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
VPS4BO75351 AL031584.1-201ENST00000447169 754 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 OR52J1P-201ENST00000450596 932 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS4BO75351 AC022431.1-201ENST00000450941 438 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS4BO75351 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS4BO75351 RNU6-1218P-201ENST00000458990 108 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS4BO75351 AC104685.1-201ENST00000502445 371 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS4BO75351 RNA5SP373-201ENST00000517271 95 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AC027309.2-201ENST00000520566 192 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS4BO75351 AP002963.1-201ENST00000530590 184 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS4BO75351 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS4BO75351 AC137768.1-201ENST00000549998 553 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS4BO75351 AC074051.3-201ENST00000570238 358 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms