Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC234781.2-201ENST00000426370 994 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 UBE2V1P1-201ENST00000430836 445 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AC005345.1-201ENST00000431868 217 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 RPL37P1-201ENST00000432310 284 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AL050321.1-201ENST00000432363 400 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
ZIC3O60481 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.2□□□□□ -1.74
ZIC3O60481 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.2□□□□□ -1.74
ZIC3O60481 AC104651.2-201ENST00000447549 528 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 RPL12P26-201ENST00000452430 487 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.2□□□□□ -1.74
ZIC3O60481 SCARNA10-201ENST00000459255 330 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 AC010307.1-201ENST00000467206 836 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 RN7SL738P-201ENST00000470264 297 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AC104763.1-201ENST00000475274 360 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.2□□□□□ -1.74
ZIC3O60481 LINC00888-204ENST00000487386 421 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.2□□□□□ -1.74
ZIC3O60481 RPF2P2-201ENST00000504693 896 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.2□□□□□ -1.74
ZIC3O60481 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.2□□□□□ -1.74
ZIC3O60481 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 KRT19P6-201ENST00000510983 209 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 RNU6-202P-201ENST00000515998 96 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.2□□□□□ -1.74
ZIC3O60481 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.2□□□□□ -1.74
ZIC3O60481 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.2□□□□□ -1.74
ZIC3O60481 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.2□□□□□ -1.74
ZIC3O60481 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.2□□□□□ -1.74
ZIC3O60481 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 AC068993.1-201ENST00000546724 589 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.2□□□□□ -1.74
ZIC3O60481 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 MIR4330-201ENST00000579077 105 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.2□□□□□ -1.74
ZIC3O60481 AP005262.1-201ENST00000582646 997 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 VN1R90P-201ENST00000595717 726 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 AC103881.1-201ENST00000603476 538 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AC133552.5-201ENST00000604266 540 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AL354760.1-201ENST00000608357 643 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AC116447.1-201ENST00000613153 453 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AC005332.6-201ENST00000613178 446 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AC123768.4-201ENST00000616244 701 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZIC3O60481 AP000346.3-201ENST00000622821 210 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ZIC3O60481 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZIC3O60481 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.2□□□□□ -1.74
ZIC3O60481 AC135352.1-201ENST00000506173 1418 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZIC3O60481 AL513185.3-201ENST00000433335 1300 ntBASIC4.2□□□□□ -1.74
ZIC3O60481 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.19□□□□□ -1.74
ZIC3O60481 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.19□□□□□ -1.74
ZIC3O60481 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ZIC3O60481 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ZIC3O60481 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZIC3O60481 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ZIC3O60481 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZIC3O60481 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
ZIC3O60481 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZIC3O60481 AC021146.4-201ENST00000309229 279 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZIC3O60481 RNU6-492P-201ENST00000363035 104 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 Y_RNA.311-201ENST00000365068 96 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZIC3O60481 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ZIC3O60481 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.19□□□□□ -1.74
ZIC3O60481 SNORA56-201ENST00000383966 129 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 AL592291.1-201ENST00000403830 352 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 MIR1302-8-201ENST00000408342 128 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.19□□□□□ -1.74
ZIC3O60481 AC068533.2-201ENST00000411872 306 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 AL136133.1-201ENST00000413694 376 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ZIC3O60481 AC069213.2-201ENST00000420238 366 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.19□□□□□ -1.74
ZIC3O60481 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.19□□□□□ -1.74
ZIC3O60481 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ZIC3O60481 AC245028.1-201ENST00000423259 256 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.19□□□□□ -1.74
ZIC3O60481 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.19□□□□□ -1.74
ZIC3O60481 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 MTND4P32-201ENST00000437189 1237 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.19□□□□□ -1.74
ZIC3O60481 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ZIC3O60481 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.19□□□□□ -1.74
ZIC3O60481 TDGF1P1-201ENST00000445734 527 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 RPL23AP15-201ENST00000450202 459 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.19□□□□□ -1.74
ZIC3O60481 RPS15AP1-201ENST00000457423 391 ntBASIC4.19□□□□□ -1.74
ZIC3O60481 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
ZIC3O60481 MTND1P16-201ENST00000465177 898 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms