Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SSX4O60224 MIR217-201ENST00000384817 110 ntBASIC4.17□□□□□ -1.74
SSX4O60224 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 GTF2IP5-201ENST00000414608 731 ntBASIC4.17□□□□□ -1.74
SSX4O60224 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 ATG4AP1-201ENST00000416893 538 ntBASIC4.17□□□□□ -1.74
SSX4O60224 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.17□□□□□ -1.74
SSX4O60224 CNOT7P1-201ENST00000429006 852 ntBASIC4.17□□□□□ -1.74
SSX4O60224 RPS29P9-201ENST00000440360 171 ntBASIC4.17□□□□□ -1.74
SSX4O60224 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SSX4O60224 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.17□□□□□ -1.74
SSX4O60224 snoU13.1-201ENST00000459157 104 ntBASIC4.17□□□□□ -1.74
SSX4O60224 SCARNA10-201ENST00000459255 330 ntBASIC4.17□□□□□ -1.74
SSX4O60224 RPS26P28-201ENST00000470806 348 ntBASIC4.17□□□□□ -1.74
SSX4O60224 AC011005.3-201ENST00000491624 395 ntBASIC4.17□□□□□ -1.74
SSX4O60224 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.17□□□□□ -1.74
SSX4O60224 RN7SL558P-201ENST00000497468 299 ntBASIC4.17□□□□□ -1.74
SSX4O60224 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.17□□□□□ -1.74
SSX4O60224 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 RN7SKP265-201ENST00000516448 223 ntBASIC4.17□□□□□ -1.74
SSX4O60224 RNU6-885P-201ENST00000516607 104 ntBASIC4.17□□□□□ -1.74
SSX4O60224 MYL12AP1-201ENST00000518490 515 ntBASIC4.17□□□□□ -1.74
SSX4O60224 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 IGKV1-32-201ENST00000519290 311 ntBASIC4.17□□□□□ -1.74
SSX4O60224 C1GALT1P3-201ENST00000522049 819 ntBASIC4.17□□□□□ -1.74
SSX4O60224 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX4O60224 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 EIF5A2P1-201ENST00000564027 460 ntBASIC4.17□□□□□ -1.74
SSX4O60224 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 CCDC58P3-201ENST00000590792 430 ntBASIC4.17□□□□□ -1.74
SSX4O60224 AC005191.1-201ENST00000603950 358 ntBASIC4.17□□□□□ -1.74
SSX4O60224 AC010857.1-201ENST00000606398 594 ntBASIC4.17□□□□□ -1.74
SSX4O60224 AC016877.3-201ENST00000606778 504 ntBASIC4.17□□□□□ -1.74
SSX4O60224 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 AL121873.1-201ENST00000616013 524 ntBASIC4.17□□□□□ -1.74
SSX4O60224 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX4O60224 AC090506.2-201ENST00000624521 419 ntBASIC4.17□□□□□ -1.74
SSX4O60224 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.17□□□□□ -1.74
SSX4O60224 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SSX4O60224 AC107081.3-201ENST00000612715 2034 ntBASIC4.17□□□□□ -1.74
SSX4O60224 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.17□□□□□ -1.74
SSX4O60224 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SSX4O60224 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.17□□□□□ -1.74
SSX4O60224 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.16□□□□□ -1.74
SSX4O60224 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX4O60224 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX4O60224 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SSX4O60224 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX4O60224 MFSD8-220ENST00000641243 1422 ntBASIC4.16□□□□□ -1.74
SSX4O60224 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.16□□□□□ -1.74
SSX4O60224 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX4O60224 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX4O60224 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX4O60224 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX4O60224 TMSB4XP8-201ENST00000402089 135 ntBASIC4.16□□□□□ -1.74
SSX4O60224 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSX4O60224 AL139098.1-201ENST00000407291 389 ntBASIC4.16□□□□□ -1.74
SSX4O60224 RN7SKP100-201ENST00000411258 284 ntBASIC4.16□□□□□ -1.74
SSX4O60224 TMSB4XP6-201ENST00000415187 135 ntBASIC4.16□□□□□ -1.74
SSX4O60224 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.16□□□□□ -1.74
SSX4O60224 TMSB4XP1-201ENST00000424567 135 ntBASIC4.16□□□□□ -1.74
SSX4O60224 Z93242.1-201ENST00000427102 353 ntBASIC4.16□□□□□ -1.74
SSX4O60224 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.16□□□□□ -1.74
SSX4O60224 AL513175.1-201ENST00000431492 780 ntBASIC4.16□□□□□ -1.74
SSX4O60224 NRBF2P3-201ENST00000432731 865 ntBASIC4.16□□□□□ -1.74
SSX4O60224 GTF2IP7-202ENST00000436677 309 ntBASIC4.16□□□□□ -1.74
SSX4O60224 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX4O60224 Z99714.1-201ENST00000450463 807 ntBASIC4.16□□□□□ -1.74
SSX4O60224 AURKAPS2-201ENST00000454983 333 ntBASIC4.16□□□□□ -1.74
SSX4O60224 NF1P3-201ENST00000457709 450 ntBASIC4.16□□□□□ -1.74
SSX4O60224 SNORD11.1-201ENST00000459482 85 ntBASIC4.16□□□□□ -1.74
SSX4O60224 RN7SL385P-201ENST00000468873 276 ntBASIC4.16□□□□□ -1.74
SSX4O60224 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.16□□□□□ -1.74
SSX4O60224 AC110792.2-201ENST00000510278 224 ntBASIC4.16□□□□□ -1.74
SSX4O60224 PPBPP1-201ENST00000510807 373 ntBASIC4.16□□□□□ -1.74
SSX4O60224 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX4O60224 RN7SKP92-201ENST00000517266 244 ntBASIC4.16□□□□□ -1.74
SSX4O60224 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX4O60224 SOD1P3-201ENST00000518682 454 ntBASIC4.16□□□□□ -1.74
SSX4O60224 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SSX4O60224 AP001317.1-201ENST00000531194 960 ntBASIC4.16□□□□□ -1.74
SSX4O60224 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX4O60224 AL158211.1-201ENST00000566763 763 ntBASIC4.16□□□□□ -1.74
SSX4O60224 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX4O60224 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX4O60224 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX4O60224 BNIP3P38-201ENST00000601117 544 ntBASIC4.16□□□□□ -1.74
SSX4O60224 AL359535.1-201ENST00000612100 1087 ntBASIC4.16□□□□□ -1.74
SSX4O60224 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX4O60224 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.16□□□□□ -1.74
SSX4O60224 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.16□□□□□ -1.74
SSX4O60224 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms