Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CUX2O14529 AC007685.1-201ENST00000329806 452 ntBASIC6.17□□□□□ -1.42
CUX2O14529 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.17□□□□□ -1.42
CUX2O14529 AL357075.1-201ENST00000404107 726 ntBASIC6.17□□□□□ -1.42
CUX2O14529 RN7SKP111-201ENST00000410349 271 ntBASIC6.17□□□□□ -1.42
CUX2O14529 HSPA8P17-201ENST00000427029 1382 ntBASIC6.17□□□□□ -1.42
CUX2O14529 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.17□□□□□ -1.42
CUX2O14529 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CUX2O14529 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.17□□□□□ -1.42
CUX2O14529 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC6.17□□□□□ -1.42
CUX2O14529 RNU1-41P-201ENST00000516161 162 ntBASIC6.17□□□□□ -1.42
CUX2O14529 RNU1-48P-201ENST00000516400 162 ntBASIC6.17□□□□□ -1.42
CUX2O14529 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC6.17□□□□□ -1.42
CUX2O14529 AC091544.4-201ENST00000555268 342 ntBASIC6.17□□□□□ -1.42
CUX2O14529 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.17□□□□□ -1.42
CUX2O14529 AL591424.2-201ENST00000617023 128 ntBASIC6.17□□□□□ -1.42
CUX2O14529 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CUX2O14529 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CUX2O14529 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CUX2O14529 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUX2O14529 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CUX2O14529 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CUX2O14529 AC245054.1-201ENST00000420944 258 ntBASIC6.16□□□□□ -1.42
CUX2O14529 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.16□□□□□ -1.42
CUX2O14529 SETP5-201ENST00000437270 562 ntBASIC6.16□□□□□ -1.42
CUX2O14529 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.16□□□□□ -1.42
CUX2O14529 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.16□□□□□ -1.42
CUX2O14529 APOA2-205ENST00000468465 421 ntTSL 2 BASIC6.16□□□□□ -1.42
CUX2O14529 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.16□□□□□ -1.42
CUX2O14529 AC103783.1-201ENST00000520506 373 ntBASIC6.16□□□□□ -1.42
CUX2O14529 ATP5F1P5-201ENST00000526403 760 ntBASIC6.16□□□□□ -1.42
CUX2O14529 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUX2O14529 MIR4435-1-201ENST00000582552 80 ntBASIC6.16□□□□□ -1.42
CUX2O14529 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.16□□□□□ -1.42
CUX2O14529 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.16□□□□□ -1.42
CUX2O14529 AC010809.3-201ENST00000621310 641 ntBASIC6.16□□□□□ -1.42
CUX2O14529 AP003485.2-201ENST00000623636 610 ntBASIC6.16□□□□□ -1.42
CUX2O14529 AC010149.2-201ENST00000637608 315 ntBASIC6.16□□□□□ -1.42
CUX2O14529 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.16□□□□□ -1.42
CUX2O14529 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CUX2O14529 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC6.16□□□□□ -1.42
CUX2O14529 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CUX2O14529 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CUX2O14529 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CUX2O14529 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CUX2O14529 AL138885.1-201ENST00000405921 675 ntBASIC6.15□□□□□ -1.42
CUX2O14529 BX323014.1-201ENST00000412876 237 ntBASIC6.15□□□□□ -1.42
CUX2O14529 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.15□□□□□ -1.42
CUX2O14529 VN1R40P-201ENST00000455196 941 ntBASIC6.15□□□□□ -1.42
CUX2O14529 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.15□□□□□ -1.42
CUX2O14529 VN1R104P-201ENST00000505115 1009 ntBASIC6.15□□□□□ -1.42
CUX2O14529 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CUX2O14529 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6.15□□□□□ -1.42
CUX2O14529 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
CUX2O14529 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.15□□□□□ -1.42
CUX2O14529 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CUX2O14529 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
CUX2O14529 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CUX2O14529 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC6.15□□□□□ -1.43
CUX2O14529 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CUX2O14529 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.15□□□□□ -1.43
CUX2O14529 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.15□□□□□ -1.43
CUX2O14529 Z93242.1-201ENST00000427102 353 ntBASIC6.15□□□□□ -1.43
CUX2O14529 AC006028.1-201ENST00000438379 402 ntBASIC6.15□□□□□ -1.43
CUX2O14529 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.15□□□□□ -1.43
CUX2O14529 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.15□□□□□ -1.43
CUX2O14529 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CUX2O14529 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.15□□□□□ -1.43
CUX2O14529 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.15□□□□□ -1.43
CUX2O14529 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.15□□□□□ -1.43
CUX2O14529 AC016252.1-201ENST00000609721 474 ntBASIC6.15□□□□□ -1.43
CUX2O14529 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC6.15□□□□□ -1.43
CUX2O14529 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CUX2O14529 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC6.14□□□□□ -1.43
CUX2O14529 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.14□□□□□ -1.43
CUX2O14529 OR51A6P-201ENST00000418680 1004 ntBASIC6.14□□□□□ -1.43
CUX2O14529 AC010095.1-201ENST00000443543 144 ntBASIC6.14□□□□□ -1.43
CUX2O14529 AC110794.1-201ENST00000505816 425 ntBASIC6.14□□□□□ -1.43
CUX2O14529 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.14□□□□□ -1.43
CUX2O14529 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.14□□□□□ -1.43
CUX2O14529 UBTFL9-201ENST00000534504 1148 ntBASIC6.14□□□□□ -1.43
CUX2O14529 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.14□□□□□ -1.43
CUX2O14529 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.14□□□□□ -1.43
CUX2O14529 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CUX2O14529 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUX2O14529 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUX2O14529 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUX2O14529 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CUX2O14529 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CUX2O14529 AC104446.1-201ENST00000613728 1321 ntBASIC6.13□□□□□ -1.43
CUX2O14529 RHOT1P2-201ENST00000366423 333 ntBASIC6.13□□□□□ -1.43
CUX2O14529 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.13□□□□□ -1.43
CUX2O14529 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CUX2O14529 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC6.13□□□□□ -1.43
CUX2O14529 AL645931.1-201ENST00000439737 410 ntBASIC6.13□□□□□ -1.43
CUX2O14529 HMGB1P21-201ENST00000502313 581 ntBASIC6.13□□□□□ -1.43
CUX2O14529 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CUX2O14529 AC008011.1-201ENST00000545989 227 ntBASIC6.13□□□□□ -1.43
CUX2O14529 IGKV2OR2-8-201ENST00000558710 300 ntBASIC6.13□□□□□ -1.43
CUX2O14529 AC090877.1-201ENST00000561418 344 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms