Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NPM1P34-201ENST00000428821 893 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 KCTD10P1-201ENST00000434203 625 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 OR4C10P-201ENST00000434991 931 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AL512326.1-201ENST00000443050 721 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AL035407.2-201ENST00000454090 378 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 RPL32P14-201ENST00000463196 378 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC008565.1-201ENST00000509046 885 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC121161.1-201ENST00000510606 652 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP315-201ENST00000516340 116 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP519-201ENST00000516480 119 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 RNA5SP312-201ENST00000517068 116 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC083923.1-201ENST00000523708 376 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 C1DP5-201ENST00000525775 383 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 RPL23AP97-201ENST00000568955 471 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AGGF1P6-201ENST00000569213 976 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 MIR1254-2-201ENST00000579553 63 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 FRG1HP-204ENST00000617940 757 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 MIR8059-201ENST00000620427 81 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 AC132825.7-201ENST00000638744 335 ntBASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NPIPA2E9PIF3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 MTCO1P4-201ENST00000520516 1409 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 SPRR2C-201ENST00000290702 219 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 ENSAP3-201ENST00000312710 333 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 RNU1-13P-201ENST00000384499 162 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 BX664727.1-201ENST00000416024 466 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 RPS12P23-201ENST00000419579 400 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC008065.1-201ENST00000428525 348 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 RPS26P40-201ENST00000435209 294 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC092809.1-201ENST00000441469 474 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AL049829.1-201ENST00000465411 156 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 RPL21P47-201ENST00000483696 477 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 RN7SL691P-201ENST00000494487 301 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC090071.1-201ENST00000507713 644 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC005351.1-201ENST00000511152 786 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 KCTD9P2-201ENST00000512203 1013 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 PTP4A1P6-201ENST00000531034 478 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC100770.1-201ENST00000532310 322 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC092451.2-201ENST00000538746 658 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 MIR4644-201ENST00000579929 84 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AP003117.2-201ENST00000606010 545 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AL669942.2-201ENST00000620352 697 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC112484.5-201ENST00000624189 228 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AP000720.1-201ENST00000625091 483 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 MIR492-201ENST00000638676 116 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 ERCC6-202ENST00000374127 1782 ntBASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NPIPA2E9PIF3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 RNU1-14P-201ENST00000362759 152 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 RNU1-64P-201ENST00000365443 163 ntBASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.87□□□□□ -1.79
NPIPA2E9PIF3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms