Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-883P-201ENST00000384597 107 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 RNU6-146P-201ENST00000384602 108 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 RNU6-1176P-201ENST00000390955 107 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC013410.2-201ENST00000422627 201 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 RNF19BPX-201ENST00000426224 625 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 RWDD4P2-201ENST00000426392 563 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC006989.1-201ENST00000427212 131 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 RPS6P12-201ENST00000432491 726 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC074367.1-201ENST00000438685 1125 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 RPL31P20-201ENST00000449593 360 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 PPIAP21-201ENST00000464473 501 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 RPL23AP73-201ENST00000492507 471 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC026784.1-201ENST00000507986 352 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 RNU6-352P-201ENST00000516908 107 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC106785.3-201ENST00000564064 847 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC115621.1-201ENST00000604653 858 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC135803.1-201ENST00000608748 565 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AL592494.3-201ENST00000609485 464 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC004825.2-201ENST00000616634 455 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 AC112484.5-201ENST00000624189 228 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 MIR6715B-201ENST00000637172 77 ntBASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TRIM49D1C9J1S8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 RNA5SP42-201ENST00000364278 115 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 RNA5SP235-201ENST00000365411 114 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL022722.2-201ENST00000402519 180 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL136116.1-201ENST00000403591 381 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 ZNF602P-201ENST00000405929 924 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC073508.1-201ENST00000428866 656 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL645931.1-201ENST00000439737 410 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 RPL21P133-201ENST00000443666 476 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 MTND5P8-201ENST00000449817 1083 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC004801.2-202ENST00000463559 283 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC015908.1-201ENST00000478739 476 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 FCF1P3-201ENST00000496394 590 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 PCBP2P3-201ENST00000509726 843 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 SETP12-201ENST00000514068 805 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 SCARNA14-201ENST00000516903 136 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 IGKV2D-23-201ENST00000518179 286 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 OR7E13P-201ENST00000526052 910 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL591034.3-201ENST00000605511 685 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 RMST_5.1-201ENST00000618704 126 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 MIR492-201ENST00000638676 116 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AL732372.2-225ENST00000642124 456 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC026951.1-201ENST00000559530 2459 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 AC009951.1-201ENST00000623674 2614 ntBASIC3.68□□□□□ -1.82
TRIM49D1C9J1S8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms