Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 AL354760.1-201ENST00000608357 643 ntBASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 FAM25E-202ENST00000608562 189 ntBASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 AC122108.2-201ENST00000611946 526 ntBASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 AC091931.1-201ENST00000623488 728 ntBASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 AL353662.3-201ENST00000625131 237 ntBASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 MKKS-204ENST00000639674 192 ntBASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
DTX4Q9Y2E6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC107982.1-201ENST00000507171 1300 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AL133243.3-201ENST00000617415 3004 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 RNU1-94P-201ENST00000362627 173 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 RNU6-931P-201ENST00000363850 107 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 RNU6-115P-201ENST00000364310 107 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 SUGT1P1-201ENST00000379514 476 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AL136133.1-201ENST00000413694 376 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 FCF1P2-201ENST00000415284 583 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 P2RY10P2-201ENST00000416730 913 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 RPL31P54-201ENST00000429803 370 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC008072.1-201ENST00000434254 824 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 PRPF38AP2-201ENST00000438179 851 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 EIF4A1P11-201ENST00000451239 222 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 NF1P3-201ENST00000457709 450 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 OR5BM1P-201ENST00000512021 366 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 HNRNPKP5-201ENST00000515300 253 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 SMARCE1P4-201ENST00000523647 241 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AP001922.4-201ENST00000526967 290 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC090312.1-201ENST00000580637 348 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC008687.2-201ENST00000597865 520 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AC105129.3-201ENST00000605455 485 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AL049539.1-201ENST00000611964 459 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 AP001784.1-201ENST00000624107 428 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 ELL2P3-201ENST00000457883 1602 ntBASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
DTX4Q9Y2E6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
DTX4Q9Y2E6 SAMMSON-226ENST00000642089 1582 ntBASIC4.53□□□□□ -1.69
DTX4Q9Y2E6 AC087359.1-201ENST00000508335 1740 ntBASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 RNU6-621P-201ENST00000364752 109 ntBASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AL133270.1-201ENST00000402635 279 ntBASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 COX6B1P1-201ENST00000415962 213 ntBASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AL022400.1-201ENST00000423946 935 ntBASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 VN1R108P-201ENST00000431580 830 ntBASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AC010733.1-201ENST00000451515 401 ntBASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 RN7SL517P-201ENST00000462240 305 ntBASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 RPS3AP41-201ENST00000462701 778 ntBASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.52□□□□□ -1.69
DTX4Q9Y2E6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms