Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 HMGB1P19-201ENST00000517578 577 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC110801.1-201ENST00000623590 212 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AL359757.2-201ENST00000624309 274 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC127502.3-201ENST00000636170 1206 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 MTCO1P24-201ENST00000515438 1558 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 FRG1CP-201ENST00000358464 769 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 COTL1P1-201ENST00000422309 375 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 RPF2P1-201ENST00000424137 906 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AF228730.2-201ENST00000438784 848 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 Z75741.1-201ENST00000446793 314 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC073587.1-201ENST00000447093 876 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 CCRL1P1-201ENST00000449542 1053 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC011825.1-201ENST00000484967 388 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 AC006023.1-201ENST00000603944 259 ntBASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.26□□□□□ -1.57
SHANK2Q9UPX8 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 AC091862.1-201ENST00000438016 1100 ntBASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 AP001992.1-205ENST00000462248 379 ntBASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 AP000926.4-201ENST00000527351 454 ntBASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 AL390334.1-201ENST00000556395 450 ntBASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 AL451007.1-201ENST00000595491 289 ntBASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 AC233309.1-201ENST00000619522 751 ntBASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 AC079298.2-201ENST00000623885 459 ntBASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHANK2Q9UPX8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 RNA5SP197-201ENST00000363357 119 ntBASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 BMS1P3-201ENST00000372011 932 ntBASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 BX119904.1-201ENST00000432026 348 ntBASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 AC010486.1-201ENST00000511793 424 ntBASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 MYL12AP1-201ENST00000518490 515 ntBASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 MIR3945-201ENST00000581853 98 ntBASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 AL139395.1-201ENST00000603662 160 ntBASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 AC244517.3-201ENST00000616254 1235 ntBASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 AL732372.2-225ENST00000642124 456 ntBASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 SCN1A-220ENST00000641603 12506 ntBASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.24□□□□□ -1.57
SHANK2Q9UPX8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 AL034403.1-201ENST00000399414 885 ntBASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 IFNNP1-201ENST00000429219 553 ntBASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 AC023598.1-201ENST00000472521 361 ntBASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 RN7SL504P-201ENST00000494496 287 ntBASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 AC080014.1-201ENST00000496877 1201 ntBASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 RPL7L1P13-201ENST00000511702 739 ntBASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 MIR5004-201ENST00000579078 107 ntBASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 AC015813.4-201ENST00000610469 179 ntBASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 AC013412.1-201ENST00000610687 192 ntBASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 LINC02471-203ENST00000641941 4752 ntBASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHANK2Q9UPX8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 AL024507.1-201ENST00000412741 274 ntBASIC5.22□□□□□ -1.57
SHANK2Q9UPX8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms