Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC108064.1-201ENST00000513791 460 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 IFITM8P-201ENST00000522529 394 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 MTCO1P49-201ENST00000523429 802 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 OSBPL9P3-201ENST00000534523 595 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 BNIP3P33-201ENST00000598912 569 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC010680.3-201ENST00000604215 520 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 MIR92B-201ENST00000607575 96 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AL031666.3-201ENST00000609320 1006 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC083865.1-201ENST00000636634 831 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 AC011266.1-201ENST00000624119 3569 ntBASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NPIPA1Q9UND3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 MIR554-201ENST00000384874 96 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 RNU6-796P-201ENST00000391086 107 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 RNU2-6P-201ENST00000411404 190 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 OR8G2P-201ENST00000412796 908 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 MTND4P15-201ENST00000437913 1033 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 RPS7P5-201ENST00000441482 581 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 RN7SL604P-201ENST00000492589 296 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 RNU6-1102P-201ENST00000516149 96 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 RN7SKP283-201ENST00000517197 270 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 CBX3P5-201ENST00000552017 521 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC006130.2-201ENST00000586202 326 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC067852.4-201ENST00000590314 478 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 RMST_9.1-201ENST00000619945 193 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 MIR7702-201ENST00000621931 59 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 CDRT1-208ENST00000630868 794 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC008013.2-202ENST00000637965 364 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC009452.1-201ENST00000640823 606 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AP001486.2-201ENST00000561652 5113 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 MTND5P11-201ENST00000511037 1812 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 AC105074.1-201ENST00000623380 3095 ntBASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPIPA1Q9UND3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 RNU1-87P-201ENST00000363727 170 ntBASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 HNRNPDP2-201ENST00000406475 478 ntBASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 AC004987.3-201ENST00000413879 771 ntBASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 AC073508.1-201ENST00000428866 656 ntBASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 RPL23AP89-201ENST00000439324 255 ntBASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 RPS29P7-201ENST00000439662 171 ntBASIC3.8□□□□□ -1.8
NPIPA1Q9UND3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms