| CNTNAP2 | Q9UHC6 | AL671855.1-201 | ENST00000446875 | 1203 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | TPTE2P6-203 | ENST00000450973 | 649 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RPS6P2-201 | ENST00000454208 | 705 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC073636.1-202 | ENST00000457756 | 558 nt | TSL 4 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC121764.3-201 | ENST00000465946 | 384 nt | TSL 2 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | LINC02050-201 | ENST00000473938 | 712 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL133372.1-201 | ENST00000493565 | 745 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC010273.1-201 | ENST00000504129 | 946 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC091860.1-201 | ENST00000505723 | 432 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MTCO3P7-201 | ENST00000510008 | 774 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | OR5BM1P-201 | ENST00000512021 | 366 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MTCO2P32-201 | ENST00000514865 | 403 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RNA5SP49-201 | ENST00000516450 | 115 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC107882.1-201 | ENST00000530837 | 477 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | PARPBP-209 | ENST00000537257 | 976 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL352979.3-201 | ENST00000553515 | 247 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | LINC02325-202 | ENST00000554260 | 567 nt | TSL 4 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC110023.1-201 | ENST00000554318 | 457 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP005205.1-201 | ENST00000563503 | 508 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | CMC2-208 | ENST00000564249 | 890 nt | APPRIS P1 TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC122134.1-201 | ENST00000565664 | 1104 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MIR4719-201 | ENST00000585233 | 84 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | SLC25A36P1-201 | ENST00000590111 | 465 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | SLC14A2-AS1-204 | ENST00000592899 | 359 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC072062.1-205 | ENST00000595058 | 962 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP003973.1-201 | ENST00000604639 | 691 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC008035.1-201 | ENST00000607353 | 448 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC116165.2-201 | ENST00000616705 | 206 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ZYXP1-201 | ENST00000617638 | 118 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC092683.2-203 | ENST00000618807 | 788 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | DARS-AS1-230 | ENST00000631306 | 530 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | BBX-206 | ENST00000415149 | 8930 nt | APPRIS P3 TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | LRRC9-202 | ENST00000445360 | 4717 nt | APPRIS P1 TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | ELAVL4-206 | ENST00000371827 | 3775 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | DDX18P4-201 | ENST00000511690 | 1966 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | TAS2R20-201 | ENST00000538986 | 1381 nt | APPRIS P1 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | VPS13C-201 | ENST00000249837 | 13300 nt | APPRIS P3 TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | KIAA0586-202 | ENST00000354386 | 5226 nt | APPRIS ALT2 TSL 2 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | DDR2-202 | ENST00000367922 | 10160 nt | APPRIS P1 TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC092104.1-201 | ENST00000497346 | 1441 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC010186.3-201 | ENST00000537616 | 2508 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | C8orf4-201 | ENST00000315792 | 1854 nt | APPRIS P1 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC079915.1-201 | ENST00000584382 | 2780 nt | TSL 2 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | POLK-204 | ENST00000504026 | 1484 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RNA5SP515-201 | ENST00000364570 | 118 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | S100A10-201 | ENST00000368809 | 616 nt | APPRIS P1 TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL161909.1-201 | ENST00000397390 | 712 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL022722.2-201 | ENST00000402519 | 180 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | SF3B1-202 | ENST00000409915 | 600 nt | TSL 2 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC118345.1-201 | ENST00000411785 | 366 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC013286.1-201 | ENST00000412137 | 381 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | LINC01614-201 | ENST00000415479 | 648 nt | TSL 2 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL139240.1-201 | ENST00000422963 | 505 nt | TSL 2 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | BTF3P10-201 | ENST00000433415 | 495 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | MTCYBP29-201 | ENST00000436327 | 1006 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | NUDT7-202 | ENST00000437314 | 930 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP000542.1-201 | ENST00000448473 | 371 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC010884.1-201 | ENST00000456519 | 642 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | IGKV2D-30-201 | ENST00000474213 | 395 nt | APPRIS P1 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RPL21P6-201 | ENST00000479171 | 504 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC025470.2-201 | ENST00000506106 | 897 nt | TSL 2 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC093297.2-204 | ENST00000508945 | 295 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | IGHVIII-2-1-201 | ENST00000518843 | 291 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC068992.1-201 | ENST00000521411 | 543 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC013714.1-201 | ENST00000524707 | 747 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP004247.1-201 | ENST00000531556 | 1289 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | LINC02552-203 | ENST00000545630 | 583 nt | TSL 2 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | EEF1B2P4-201 | ENST00000551398 | 348 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC051619.4-201 | ENST00000560034 | 292 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC092868.3-201 | ENST00000560515 | 784 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC012378.1-201 | ENST00000561155 | 364 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP005530.1-201 | ENST00000572608 | 567 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC099566.1-211 | ENST00000595188 | 737 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AP003465.2-201 | ENST00000602571 | 373 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL137072.1-201 | ENST00000603444 | 466 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | RBM11P1-201 | ENST00000604951 | 799 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC010738.1-201 | ENST00000604970 | 987 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC097376.2-202 | ENST00000608345 | 433 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC099566.1-205 | ENST00000609411 | 657 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC092106.3-201 | ENST00000611308 | 722 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | FAM27D1-201 | ENST00000612308 | 341 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AL121890.2-201 | ENST00000617644 | 465 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | BCLAF1-207 | ENST00000527759 | 4373 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.71 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | WAC-221 | ENST00000628285 | 2740 nt | TSL 1 (best) BASIC | 4.71 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | AC073544.1-201 | ENST00000600110 | 1595 nt | BASIC | 4.71 | □□□□□ -1.65 | | |
| CNTNAP2 | Q9UHC6 | SLC17A3-204 | ENST00000397060 | 2052 nt | APPRIS P1 TSL 2 BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | PLCE1-202 | ENST00000371380 | 12024 nt | APPRIS P3 TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | LARP1BP1-201 | ENST00000506036 | 1359 nt | BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | PRG4-202 | ENST00000367483 | 4921 nt | TSL 5 BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | PREPL-205 | ENST00000409411 | 4725 nt | TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | AGTR1-202 | ENST00000402260 | 2172 nt | TSL 5 BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | AC020571.1-202 | ENST00000433933 | 1413 nt | TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | DEPDC1-202 | ENST00000456315 | 5331 nt | TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | PPP1R9A-205 | ENST00000424654 | 4058 nt | TSL 5 BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | FOXP2-205 | ENST00000393489 | 2285 nt | TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | CFHR3-206 | ENST00000617219 | 1462 nt | TSL 5 BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | SMC2-AS1-201 | ENST00000603487 | 7020 nt | TSL 2 BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | MS4A14-208 | ENST00000531783 | 2910 nt | APPRIS ALT2 TSL 5 BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | KLRC4-201 | ENST00000309384 | 930 nt | APPRIS P1 TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |
| CNTNAP2 | Q9UHC6 | C11orf74-201 | ENST00000334307 | 863 nt | APPRIS P3 TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |