Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 OR8R1P-201ENST00000543943 764 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC007224.1-201ENST00000564410 144 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC087499.8-201ENST00000578406 226 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC022884.3-201ENST00000579571 248 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 RNU1-30P-201ENST00000606575 163 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 AL354798.1-201ENST00000622505 329 ntBASIC3.74□□□□□ -1.81
TREX1Q9NSU2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.74□□□□□ -1.81
TREX1Q9NSU2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 RNA5SP167-201ENST00000365461 116 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 SETD6P1-201ENST00000444575 317 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 ANP32BP2-201ENST00000454525 545 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 RNU7-27P-201ENST00000459281 62 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 SNORD108-201ENST00000459332 71 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 SNX5P1-201ENST00000505757 1041 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 NDUFB4P9-201ENST00000511646 388 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 USP9YP5-201ENST00000511770 630 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC117525.1-201ENST00000515228 503 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC141257.3-201ENST00000572906 215 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC099489.2-201ENST00000574976 260 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AP001180.3-201ENST00000582221 145 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC067852.4-201ENST00000590314 478 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 AC024560.2-201ENST00000507981 1497 ntBASIC3.73□□□□□ -1.81
TREX1Q9NSU2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TREX1Q9NSU2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 MIR30B-201ENST00000384850 88 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AL591419.1-201ENST00000427423 339 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 ARL5AP3-201ENST00000439327 386 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 RPL9P32-201ENST00000464118 620 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 RPS20P21-201ENST00000466859 343 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 Vault.1-201ENST00000516474 102 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 OR4V1P-201ENST00000525394 1140 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 OR7E13P-201ENST00000526052 910 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 NF1P5-201ENST00000588287 448 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 KLKP1-201ENST00000595979 403 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AL163642.2-201ENST00000604722 1019 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AC110741.2-201ENST00000605278 268 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AL391834.1-201ENST00000609609 560 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AC020978.9-201ENST00000624380 1141 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 AC119674.1-212ENST00000641155 993 ntBASIC3.72□□□□□ -1.81
TREX1Q9NSU2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
TREX1Q9NSU2 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms