Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC097063.1-201ENST00000426714 1797 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 HSPA8P17-201ENST00000427029 1382 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 RPL32P3-201ENST00000359025 275 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 RNA5SP88-201ENST00000365560 109 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 RNU6-1300P-201ENST00000391046 108 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 MTCYBP36-201ENST00000404146 440 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 RNU2-50P-201ENST00000410494 143 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC068533.2-201ENST00000411872 306 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 MTATP6P27-201ENST00000416987 621 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC114814.2-201ENST00000419195 485 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC009237.2-201ENST00000421358 284 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 REREP1Y-201ENST00000422655 198 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC000111.3-201ENST00000433478 193 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 NPM1P18-201ENST00000434232 732 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 REREP2Y-201ENST00000439103 200 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 MTATP6P30-201ENST00000443540 664 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 MED28P3-201ENST00000444288 531 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 TPT1P14-201ENST00000448018 505 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 NFU1P2-201ENST00000448700 469 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 BX248409.1-201ENST00000455497 255 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 RPS3AP17-201ENST00000472594 777 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AP000797.2-201ENST00000475768 606 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC090013.1-201ENST00000485147 480 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 RPL23AP72-201ENST00000492447 435 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC023424.2-201ENST00000493479 777 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC090525.3-201ENST00000605601 189 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC008945.2-201ENST00000606056 604 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 Z95114.1-201ENST00000624264 14574 ntBASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PDLIM7Q9NR12 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC020656.2-201ENST00000613291 5309 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 Y_RNA.813-201ENST00000364639 102 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 SNORA62.2-201ENST00000364672 152 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC068538.1-201ENST00000376856 336 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 MIR1284-201ENST00000408337 120 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 MIR1182-201ENST00000408363 97 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AL354868.1-201ENST00000417077 482 ntBASIC5.82□□□□□ -1.48
PDLIM7Q9NR12 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms