Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LSM3P2-201ENST00000551246 273 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 MIR4697-201ENST00000582977 78 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 AC006272.2-201ENST00000594725 163 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 AC010200.2-201ENST00000605098 235 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 AC012414.7-202ENST00000622705 1090 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 NCLP2-201ENST00000416078 1462 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTA1Q9NP79 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 AP001029.2-203ENST00000589795 4910 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.55□□□□□ -1.52
VTA1Q9NP79 ZNF37BP-203ENST00000452306 1352 ntBASIC5.55□□□□□ -1.52
VTA1Q9NP79 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTA1Q9NP79 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTA1Q9NP79 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTA1Q9NP79 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AP000756.2-201ENST00000624168 2567 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 RNU6-249P-201ENST00000363016 102 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 RNU6-216P-201ENST00000363282 104 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTA1Q9NP79 Y_RNA.436-201ENST00000384097 102 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 MIR1284-201ENST00000408337 120 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC079809.1-201ENST00000415468 276 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 RPL37P1-201ENST00000432310 284 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 RPL23AP35-201ENST00000451906 501 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 RPL10P17-201ENST00000453852 316 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 RPS4XP12-201ENST00000461747 709 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC023424.1-201ENST00000496058 459 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 MTCYBP37-201ENST00000510642 1133 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 RNU6-513P-201ENST00000516104 104 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC027369.5-201ENST00000533838 755 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC064872.1-201ENST00000604823 1072 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC069304.2-201ENST00000605154 435 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC007497.1-201ENST00000610421 561 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC116447.1-201ENST00000613153 453 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 MIR6853-201ENST00000619642 74 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC091932.2-201ENST00000623014 291 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC007494.3-201ENST00000624660 743 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 PCMTD1P7-201ENST00000634506 357 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC026951.1-201ENST00000559530 2459 ntBASIC5.54□□□□□ -1.52
VTA1Q9NP79 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VTA1Q9NP79 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTA1Q9NP79 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 XPOTP1-201ENST00000443317 2398 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 CR381670.1-201ENST00000624291 1693 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTA1Q9NP79 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTA1Q9NP79 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTA1Q9NP79 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTA1Q9NP79 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.53□□□□□ -1.52
VTA1Q9NP79 Y_RNA.51-201ENST00000362725 102 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 Y_RNA.408-201ENST00000383987 102 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 Y_RNA.560-201ENST00000384689 102 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 RNA5SP332-201ENST00000391063 115 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 FABP12P1-201ENST00000401911 322 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VTA1Q9NP79 MTCO3P31-201ENST00000405526 789 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VTA1Q9NP79 GPS2P1-201ENST00000411761 986 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC068533.2-201ENST00000411872 306 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 RSU1P3-201ENST00000412878 835 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 TBCAP2-201ENST00000416175 326 ntBASIC5.53□□□□□ -1.52
VTA1Q9NP79 AC009302.1-201ENST00000417147 390 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms